Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1839 ATGCCCATCTTCTCTGCAACTTTCGGCTCTTTCACTTCCATCTCCTTCCTCTCTGCTTCACAATCACAATCACACCTTTCTCCTTTCGTGAATTTTCCCCACAAGTTAACCGTGAAGACCCCTTGGCAATGGCAATGGCATCACTATCACACTGCTAAGGTCTTCTTCTCTGGCAATACTCAAATTGACCAAAATCCTGACGCTGGACTTCTTCAACGCCCTACTCCTCCAGACCCACAGGATGACGCTCGTCAGGCTCGGAGATCGTCAGATTGGAAGGCTGCAAAGGCATATAAAGATAGTGGACTCATTTATAATGGTAGGGTTGAAGGTTTTAATTCTGGAGGCCTGCTAGTTCGATTTTATTCTATTCTGGGGTTTCTCCCATTCCCACAATTGAGTCCGTTGCATGCTTGTAAAGAACCAGATAAATCTATTCAAGAAATTGCAAAAGGCTTACTCGGTTCAATTATATCGGTGAAGGTGATTCTAGCAGACGAGGATAACAAGAAATTGATCTTTTCTGAAAAGGAAGCTGCCTGgtccaaattttcaaaacagGTCAATGTAGGGGACATTTTTGAAGCAAGAGTTGGTTATGTCGAGGACTATGGTGCTTTTGTTCATTTGCGCTTCCCTGACGGTCTTTATCGCCTTACTGGACTAATACACGTGTCAGAAGTGTCATGGGATCTAATTCATGATGTCAGAGATATCTTAAAAGCGGGTGATGAAGTGAGGGTCAAAGTTGTCGGTATTGATTGGGGAAAATCAAGGATTAATCTATCAATTAAACAGCTAGAAGAAGATCCACTTCTAGAAACTCTGGACAAAGTAATACCTCAGgATGGTTTAGCTGATTCTATGAGCGGTGGTGATAGTGGAGGTATTGAGCCTCTTCCAGGGCTTGAAACAATCCTTGAAGAGCTACTACAGGAAGATGGTATATTTGATGTAAGAATCAGCCGTCAAGGGTTTGAAAAACGAGTGGTCTCGCAAGACTTGCAGCTTTGGCTTTCTAATGCACCTCCCACAAACCAAAGGTTTACTCTCCTTGCTCGGGCTGGAAGACAGGTGCAGGAGATACATCTGACCACATCCCTTGATCAGGAAGGCATCAAGAGGGCATTACAACGAGTATTGGAGCGTGTCCCCTGA 1158 0.4344 MPIFSATFGSFTSISFLSASQSQSHLSPFVNFPHKLTVKTPWQWQWHHYHTAKVFFSGNTQIDQNPDAGLLQRPTPPDPQDDARQARRSSDWKAAKAYKDSGLIYNGRVEGFNSGGLLVRFYSILGFLPFPQLSPLHACKEPDKSIQEIAKGLLGSIISVKVILADEDNKKLIFSEKEAAWSKFSKQVNVGDIFEARVGYVEDYGAFVHLRFPDGLYRLTGLIHVSEVSWDLIHDVRDILKAGDEVRVKVVGIDWGKSRINLSIKQLEEDPLLETLDKVIPQDGLADSMSGGDSGGIEPLPGLETILEELLQEDGIFDVRISRQGFEKRVVSQDLQLWLSNAPPTNQRFTLLARAGRQVQEIHLTTSLDQEGIKRALQRVLERVP 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1839 385 Pfam S1 RNA binding domain 188 265 IPR003029 GO:0003676
Ssu9g1839 385 PANTHER OS03G0844900 PROTEIN 10 385 - -
Ssu9g1839 385 ProSiteProfiles S1 domain profile. 191 265 IPR003029 GO:0003676
Ssu9g1839 385 ProSiteProfiles S1 domain profile. 102 177 IPR003029 GO:0003676
Ssu9g1839 385 MobiDBLite consensus disorder prediction 66 90 - -
Ssu9g1839 385 Gene3D - 182 270 IPR012340 -
Ssu9g1839 385 SMART S1_6 189 265 IPR022967 -
Ssu9g1839 385 SMART S1_6 100 177 IPR022967 -
Ssu9g1839 385 SUPERFAMILY Nucleic acid-binding proteins 102 177 IPR012340 -
Ssu9g1839 385 SUPERFAMILY Nucleic acid-binding proteins 178 270 IPR012340 -
Ssu9g1839 385 Gene3D - 92 181 IPR012340 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1839 - - gmx:100798303 650.973