Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1819 ATGTACGGATCCGAGAATAACCGAGAAGACTCGGAGCGAACGGCTTTCAGAAGAGCAGAGAAGAGGTACAAGCTCTACTACGACAACAATGGTTCctccaaaaacaaaaaAAAAAAACAACCCAAACCCGTGGACTTAACGGAGGTCCTTGACTTCAGATCCATTCTAGAATGCCATCTTCGAAACGGTGCGCTTCCTCCGGGTGTTATCGTTCTTCACGACAAGTTCACCTCTCCGGTTTTTTCTCTGCAAAATCGCCCaggcttttattttattcctggGGCATTAAGCATAGAGAAACAATGTAGTTTGATAAGGGAGACCTTGACTGATTTCCCGCGGCCACCTAACAGAACAAATCACAATGCCATGTATGGTCCTATTCATGATGTGTTTGTTGCGGCTAAGGAAGGGAAAGTTTTGGTTGAAGAGAACTCTCCAATTACTTCATCTGAAGCTGGTACTGATATAGATCATGGAGACTGTAAGGAATGGAAGTTTACTACCGAAAAGGAAGCGATGTTGAGGAAGGGCAGATCTGTTTCTGCTTCTGCGATGCTTCGGAAGTTGCGATGGAGCACCCTTGGCCTGCAATTTGATTGGTCCAAGCGGAATTATGATGTGTCTCTCCCACATAACAAAATCCCTGAAGCACTGTGCGAGCTTGCTAAACAATTGGCAAAGCCTGCTTTGCCTGCTGGTGTTGAATTCAGGCCTGAAGCTGCAATAGTGAATTACTTTGGCTTAGGGGACACATTGGGTGGCCACCTTGATGACATGGAAGCAGATTGGAGCAAGCCTATAGTTAGTTTAAGTCTGGGCTGCAAAGCCATATTTCTTTTGGGAGGAAAATCCAGAGAGGATACTCCCCTGGCAATGTTCCTTCGAAGTGGCGATGTTGTACTTATGGCTGAAGATGCAAGGGAATGCTTTCATGGGGTTCCTCGGATCTTCACAGATAAAGAAAATGCTGAAATAGGCCATCTTGAGACACAGCTGACACATGAAGATGatctttgtttcttaaaatacattcaaaCCTCTAGAATCAACATCAATATCAGACAAGTTTTTTGA 1077 0.428 MYGSENNREDSERTAFRRAEKRYKLYYDNNGSSKNKKKKQPKPVDLTEVLDFRSILECHLRNGALPPGVIVLHDKFTSPVFSLQNRPGFYFIPGALSIEKQCSLIRETLTDFPRPPNRTNHNAMYGPIHDVFVAAKEGKVLVEENSPITSSEAGTDIDHGDCKEWKFTTEKEAMLRKGRSVSASAMLRKLRWSTLGLQFDWSKRNYDVSLPHNKIPEALCELAKQLAKPALPAGVEFRPEAAIVNYFGLGDTLGGHLDDMEADWSKPIVSLSLGCKAIFLLGGKSREDTPLAMFLRSGDVVLMAEDARECFHGVPRIFTDKENAEIGHLETQLTHEDDLCFLKYIQTSRININIRQVF 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1819 358 Gene3D - 156 357 IPR037151 -
Ssu9g1819 358 PANTHER ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB 1 358 - -
Ssu9g1819 358 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 238 358 IPR005123 -
Ssu9g1819 358 Pfam 2OG-Fe(II) oxygenase superfamily 169 355 IPR027450 -
Ssu9g1819 358 PANTHER ALKYLATED DNA REPAIR PROTEIN ALKB-RELATED 1 358 IPR004574 -
Ssu9g1819 358 SUPERFAMILY Clavaminate synthase-like 87 357 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1819 K10765 - gmx:100811774 639.032