Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1815 ATGACTTGTGCCGGCGATACTTGGTTGGTTACTGTCCTGGTCGTTGCACAGAAAGTCAAGGAAGCTGAAATCACCGAGCAGGATTCACTTCTTCTGACAAGGAACCTGCTCCGAATTGCCATATTCAATATCAGTTATATCAGAGGACTATTTCCTGAGAAGTATTTCAATGATAAGTCTGTTCCTGCGTTAGGTGTATACGATGCCTTACAGAAGAAATACCTCAAGACGCTTCTGTTCTGTGTGTGCGAGGCAGTGGACGGACCAATGATTGAGGAATATGCATTTTCCTTTAGCTATTCCGACTCTGACAAAAAAGAGGTTTCGATGAATATCAACCGCACTGGAAACAAAAAGCAACGGGGAACCTTCAAGTGTAACTCAACTACAGAAATTACTCCCCAGCAAATGAGGAGTTCTGCATGTAAAATGATCCGAACTCTAATTCAGTTGATGAGAACTCTGGAGAAAATGCCAGAAGAGCGTACCATTCTGATGAAGCTCCTCTACTATGATGATGTGACGCCAGCAGATTATGAGCCTCCTTTCTTCAGGGGCTGCACAGGTGAAGAAGCTTATCATCCATGGGAGAAAAATCCATTGAAAATGGAGGTTGGGAATGTAAACAGCAAGCACTTTGTATTAGCTCTGAAGGTGAAGAGTGTGCTCGACCCTTGTGAGGATGATAATGAGGGAGTCCAAGACGATATGAGCAATGGCGATGATTCCATGCAACAGAATGAGTATTATGATACTGACAGTGAGGTTGATCTTACTCAAGGGAATCAATATATAGTTGCTCCAATAGATAAACAGCAAGGACAGGAAGATAATGGCGTGATTGATGAAGACAATACCCAGGACCCGGTAGAAGATGAGCAACAACTGGTCCGGGTCAAGGAGTGGATCAACTGTTGTCACCGTGACACTATTGAGCTTACTGACGTTCTATCAAATTTTCCAGACATCTCCGTGGTTCTAACTGAAGAGATCATGGACAAGCTTGTAGAGGAAGGTGTGCTATCAAAGATAGGGGAGGAATCCTACGCCATTAACAAGGACAAGAAATTTGAATATGAGTTCGCCATTGTGAAAGAAGAAATTGATGGTCAAATTCCTCATGTCTTTGAAAGAGCTTTGCAAGTTGAAGATCGCATATACACGAAaGCTCTCTATCATGCTCTTCCGATGACACACGTGTCAGTTACCAAGCTTCAAAGCTTGCTTGATGGAGAAGTAAACCAGACAGTAGCACGaaagataattgataaaatGGTGCGGGATGGGTTTGTTGAACCCAAAGGCAACAAAAGATTAGGAAAACGTGTTATCCATTCTGAGTTGACTGAAAGGAAATTCATTGAAGTCCAGAAAGTTCTAAGTGCTACTGAAGCTATGGATGTTGATCACAGTGAACCAGATACCAAGTCCAAAATAAATGGCTTCTGTTTAAATGGTAATGGACTAAGGCCGTTAATATTTTGTATTCCAACTCCGCAGCTTTTCGATATAGGTCAAGGAGCCTATCCATCAAAATATGAAGCGACAGAGATCTGA 1557 0.4207 MTCAGDTWLVTVLVVAQKVKEAEITEQDSLLLTRNLLRIAIFNISYIRGLFPEKYFNDKSVPALGVYDALQKKYLKTLLFCVCEAVDGPMIEEYAFSFSYSDSDKKEVSMNINRTGNKKQRGTFKCNSTTEITPQQMRSSACKMIRTLIQLMRTLEKMPEERTILMKLLYYDDVTPADYEPPFFRGCTGEEAYHPWEKNPLKMEVGNVNSKHFVLALKVKSVLDPCEDDNEGVQDDMSNGDDSMQQNEYYDTDSEVDLTQGNQYIVAPIDKQQGQEDNGVIDEDNTQDPVEDEQQLVRVKEWINCCHRDTIELTDVLSNFPDISVVLTEEIMDKLVEEGVLSKIGEESYAINKDKKFEYEFAIVKEEIDGQIPHVFERALQVEDRIYTKALYHALPMTHVSVTKLQSLLDGEVNQTVARKIIDKMVRDGFVEPKGNKRLGKRVIHSELTERKFIEVQKVLSATEAMDVDHSEPDTKSKINGFCLNGNGLRPLIFCIPTPQLFDIGQGAYPSKYEATEI 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1815 518 ProSiteProfiles HORMA domain profile. 7 219 IPR003511 -
Ssu9g1815 518 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 15 63 - -
Ssu9g1815 518 SUPERFAMILY The spindle assembly checkpoint protein mad2 23 226 IPR036570 -
Ssu9g1815 518 Gene3D HORMA domain 17 265 IPR036570 -
Ssu9g1815 518 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 65 478 - -
Ssu9g1815 518 Pfam HORMA domain 29 212 IPR003511 -
Ssu9g1815 518 PANTHER MEIOSIS-SPECIFIC PROTEIN ASY1 65 478 - -
Ssu9g1815 518 PANTHER MEIOSIS-SPECIFIC PROTEIN ASY1 15 63 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1815 K12778 - gmx:100792473 849.736