Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1796 ATGGGGTTTCTAAGGTTTATAAGAAGGTATAATTACCCCTTCAAGGACAAAACCCGAAATAGAGCATACACACTTCGGCATATGCAAGGCAGAGGCTTCTCAAAGGATGGAGTTCTTAATGGCAATGATGTGGTGCATCCAGTTCTGATCGTTGGTGCAGGACCTGTGGGTCTTGTTCTCTCTATTCTTCTCACAAAATTAGGTATTAATTGCACAGTTTTGGAGAGAAACAAGGCATTTTCAAAACATCCACAAGCACACTTCATCAACAATCGATCCATGGagATATTCCACAAAATTGATGGCCTTGTTGAAGAGATCCAGAGGTCTCAACCACCAGTAGATTTATGGaggaaatttatatattgtactTCCCTCTCTGGTTCAATTCTTGGATCTGTAGATCACATACAACCTCAAGATCTTGAGCATGTTGTCAGCCCAGTCTCTGTTGCGCACTTCTCACAGTACAAGCTAACTATGTTACTACTCAAGCGACTTGAAAATCTAGGCTTTCAAATATGTGCACCTGAAAGCTTGGAAGGAAATGAACAgtcttgtgaaaaaaaaataatggtggGCCATGAGTGTGTATCCATTGATGCCAACAATGACTTTGTAACAGTAACTGCATCTTCTATCATTAAAGGGAAGCGTGTAGAACAGAAGATTCACTGTAACATCCTTATTGGTACTGATGGTGCAGGAAGTACTGTAAGAAAGCTTGTAGGAATAGAAATGAGAGGTGAGAAGGACTTGCAAAAACTTGTCAGTGTCCATTTCTTTAGCAGAGGCCTTGGACAGTTTTTGCTTAAGGAGAATCCTGGTatgcttttttttatcttcaatacTGAAGCTATTGGGGTCCTTGTTGCTCATGATCTCAGGCAAGGGGAATTTGTATTACAGATACCCTTTTATCCACCTCAGCAAACAATTGAGGATTTCAATCCAAAGGCATGTGAGAAATTAATTAGCAAACTTGTTGGTCGAGAGTTTGGAGATGTAGATGTAATTGATATAAAGCCATGGGTTATGCATGCTGAAGTTGCCGAGAGGTTTATTAGTGGCAACCGAATATTACTTGCCGGTGATGCTGCTCATCGATTTCCTCCTGCTGGTGGATTTGGAATGAATACTGGCATTCAGGATGCCCATAATCTTGCCTGGAAAATTGCTTCTGTCATTAAGGGTATTGCCCCATCTTCAATGCTAAATACCTACGAAATCGAACGTAGACCGATTGCTTTATTCAATACAAGATTAAGTCTAGAAAACTATAAAGCTGCCATGTCTGTTCCTGCTGCACTTGGTCTCGATCCAACTGTTGCAAACAGAGTGCATCAATTTGTTATAAATGGGATTGGTTCCATCTTACCAGTGGGATTGCAGAAGGTAGCTTTGGATGGAATTTTTGGTATAGGTCGTGCACAGCTCTCAGAATTTGTCCTAAGTGAAAGTAACCCTCTTGGATCCTCAAGGTTGGCTAAGCTAAGACATATAtttgaagaaggaaaaagcCTTCAACTTCAGTTCCCTGCTGAAGATCTTGGTTTTAGGTACCTACTAGGAGCACTTATGCCAGAGAGTAATGATGTTGAGAGTCCTCCAGAAGTACTAACAGGGCGTCGGAGGGACTACACCCCTTCAGCACAACCAGGATCAAGACTGCCTCATATGTTTGTGAGAGTAAACCCATTAAGTGAGGAGACTCTTTCTACACTTGATCTTGTGTCAGGAGATAAAATTGAGTTCATTCTCATCATAGCACCTGTGGAAGAATCTTATCAACTAGCTCGTGAAGCATTCAAGGTGGCTGAGGAACAAGAAATTTCTCTCAAAGTGTGTATTTTTTGGTCTACTGATTCTGTTGAAGGTCTTGAGAAAGGAAGTGAAGCTGCATTATCACCTTGGAAGAATTATGCAGATGTTGTTGAAGTTCGGTCATCAACTTCAAATTGGTGGGATATGTGTAACATGACAAACAAAGGGGCTATTTTAGTTAGACCTGACGAACACATTGCCTGGCGTACAGGTTCAGGACTTGCTGGGGATCCTAGAGTGGAAATGCAGAGGGTGTTTTCTGCTATACTGGGAGTGcaccattaa 2109 0.4002 MGFLRFIRRYNYPFKDKTRNRAYTLRHMQGRGFSKDGVLNGNDVVHPVLIVGAGPVGLVLSILLTKLGINCTVLERNKAFSKHPQAHFINNRSMEIFHKIDGLVEEIQRSQPPVDLWRKFIYCTSLSGSILGSVDHIQPQDLEHVVSPVSVAHFSQYKLTMLLLKRLENLGFQICAPESLEGNEQSCEKKIMVGHECVSIDANNDFVTVTASSIIKGKRVEQKIHCNILIGTDGAGSTVRKLVGIEMRGEKDLQKLVSVHFFSRGLGQFLLKENPGMLFFIFNTEAIGVLVAHDLRQGEFVLQIPFYPPQQTIEDFNPKACEKLISKLVGREFGDVDVIDIKPWVMHAEVAERFISGNRILLAGDAAHRFPPAGGFGMNTGIQDAHNLAWKIASVIKGIAPSSMLNTYEIERRPIALFNTRLSLENYKAAMSVPAALGLDPTVANRVHQFVINGIGSILPVGLQKVALDGIFGIGRAQLSEFVLSESNPLGSSRLAKLRHIFEEGKSLQLQFPAEDLGFRYLLGALMPESNDVESPPEVLTGRRRDYTPSAQPGSRLPHMFVRVNPLSEETLSTLDLVSGDKIEFILIIAPVEESYQLAREAFKVAEEQEISLKVCIFWSTDSVEGLEKGSEAALSPWKNYADVVEVRSSTSNWWDMCNMTNKGAILVRPDEHIAWRTGSGLAGDPRVEMQRVFSAILGVHH 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1796 702 SUPERFAMILY FAD/NAD(P)-binding domain 47 438 IPR036188 -
Ssu9g1796 702 MobiDBLite consensus disorder prediction 533 552 - -
Ssu9g1796 702 Gene3D - 114 353 - -
Ssu9g1796 702 PANTHER FAD/NAD(P)-BINDING OXIDOREDUCTASE FAMILY PROTEIN 46 696 - -
Ssu9g1796 702 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 357 372 - -
Ssu9g1796 702 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 225 240 - -
Ssu9g1796 702 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 408 424 - -
Ssu9g1796 702 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 47 69 - -
Ssu9g1796 702 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 372 388 - -
Ssu9g1796 702 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 390 408 - -
Ssu9g1796 702 Pfam FAD binding domain 47 416 IPR002938 GO:0071949
Ssu9g1796 702 PANTHER TRK SYSTEM POTASSIUM UPTAKE PROTEIN 46 696 - -
Ssu9g1796 702 Gene3D - 514 700 - -
Ssu9g1796 702 Gene3D - 47 416 IPR036188 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1796 - - gmx:100794253 1334.7