Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1792 ATGTGGGGAGTTCTCCGAGCTCGAACGTGGTTGCGATATTCATTGCATTCACATTCAGAGGCCCTTCTTCAACGATGGAAGGTAGGGTTTTCCTCTTTGTCCGTCGTTGACGGCCGCAAGTGCCTTCTGGATCTGCAGGAGATCGAGAACGTTCTGACGGACGTTAAAGCTGACGACGTTAAGGTGATACCGGTTCCCAAACACTGCGATTGGGCCGATTTCATGGTGCTTGCCACTGGCAGGTCCACCTGGCACGTCAAGAACATCGCTCAAGCCCTAATTTACAAGGCTAAGCAGAAGCAGAAAGGAGCTGAACGAATGATGCTGCCTAGTGTGGAAGGGCAAGCAGGAGGAAAGTGGATCGTCATTGACTCTGGTAAAGTGATAGTTCATGCACTTGATGAAAAGGCTAGAGCTTACTACAATTTGGAGGGTCTTTGGACCCCAGGGACAATTCAAAATGAACCTGATGAGGATTTACAAAAAGCTTTGGTGAAGGTTCGTCGGAAAAACAATTCGAAGAAACCTGCACAAAAGAATGCTTAA 546 0.4799 MWGVLRARTWLRYSLHSHSEALLQRWKVGFSSLSVVDGRKCLLDLQEIENVLTDVKADDVKVIPVPKHCDWADFMVLATGRSTWHVKNIAQALIYKAKQKQKGAERMMLPSVEGQAGGKWIVIDSGKVIVHALDEKARAYYNLEGLWTPGTIQNEPDEDLQKALVKVRRKNNSKKPAQKNA 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1792 181 SUPERFAMILY Nucleotidyltransferase 46 154 IPR043519 -
Ssu9g1792 181 Hamap Ribosomal silencing factor RsfS [rsfS]. 38 148 IPR004394 -
Ssu9g1792 181 Gene3D Beta Polymerase, domain 2 43 162 IPR043519 -
Ssu9g1792 181 Pfam Ribosomal silencing factor during starvation 47 147 - -
Ssu9g1792 181 PANTHER MITOCHONDRIAL ASSEMBLY OF RIBOSOMAL LARGE SUBUNIT PROTEIN 1 38 172 - -
Ssu9g1792 181 TIGRFAM rsfS_iojap_ybeB: ribosome silencing factor 46 147 IPR004394 -
Ssu9g1792 181 PANTHER IOJAP SUPERFAMILY ORTHOLOG 38 172 IPR004394 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1792 - - gmx:100500386 319.701