Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1782 ATGGGCAAAGAGAAGAAAGGTGGAAGCCTGCTTGCCTTCACCGGAGCTGCTGCGGTGCTTGCAATTGCCTCAAACCTAGTCATCACCGCCATCAAGTACCAGAAGGAAAAAAATGCTAAGAAGAAAGATCTTGCAGGTTCTAAGGTGCGCGTTAACCTATCTGCATCCGAGATTCTTAAGTTAGCTGACCAAATCATTGCCAACTCAAACAAGGTCCATAATTCTGTTGCGTCGGTGCCTCTCGACAAGGTTACATACGCAAATGTTATATCACCTCTGGCAGAACTGCAAGCGCAGCAATTCCCACTGATCCAGTCTTGTGTGTTTCCGAAGCTGGTATCTACTCAGGAGGATGTACGCAAAGCAAGTGCGGAAGCTGAGCGAAGAATAGATGCTCATCTTGATGTGTGCAGCAAACGTGAAGATGTATATCTTGTCATTAAAGCATTTGCAGTAAGGAGGGAGTGGATGAATGCTGAAGCCAAACGCTTTGTTCAAATTCTGGTGAGAGATTTTGAGCGAAATGGATTAAACCTCACAGCAAGCAAAAGAGAAGAGTTGCAGCGTCTAAGGGCTCAGATTGATGAATTAAGCTTTAAATATATCCAAAATCTCAATGACGATAGCAGGTTTCTTCTCTTCAATGAGGAAGAGTTAGCTGGATTGCCTCCAGAGTTTCTCAAGGGCTTAGATAAATCGGAAaatggaaaattgaaaatttcccTGAGAAGTCATCATGTTGCAGCTGTACTTGAATTTTGCAAGGTTGGAACTACAAGGCGGATGGTATCAGGGGCATATGGGAATCGGTGTGGAGAAATCAATGTTTCTATTTTAGAAAGCCTGGTGCAACAACGCCATAAATATGCTCGCTTACTTGGCTATTCATGCTATGCAGAGTATGCCATTGATGTTAGAATGGCAAAGACTCCAAAAAAGGTGTTTGAGTTCCTGAAAGAAATATCGACAAGTTTAACTGACTTGGCCATGAAAGAACTTGATATCTTGAAAGATTTGAAGAAAAAAGAGGAAGGGGAGATTCCATTTGGAATTCAAGACCTACTGTATTATGTAAAACGGGTTGAAGAGCTGGGTTATGATTTGGACTTTGGAGAGATCAAGCAATACTTACCAATTAGTGTGGTTCTATCGGGGATCTTCAAAATTGTCCAAGATctatttgGCTTAAGGTTTGAGGAAATTGTAGGAGCTGATGTTTGGCATTGTGATGTTCGTGTTTTTTCAGTGCTGGACTTAGGTTCTAGTGAACTCTTAGGTTATTGCTACCTCGATTTGTTCTCAAGGGAAGGAAAATATGGTCATACTTGTGTGTTGGCTCTCCAGAACAGTGCATTAACAATCAGTGGGGCACagcagATACCAGTTGCATTGCTAATATCTCAGTGTCAGAAGGATGCTGATGGTAGTTCTGGATTATTGCGGTTTTCGGAAGTGGTCAGTCTTTTCCATGAGTTTGGCCACGTGGTTCAACAAATTTGCAACCGTGCATCATTTGCTAGAATTTCTGGATTATGTGTTGATCCTGACTTTGTGGAAATACCTGCTCAACTGCTAGAAAACTGGTGCTATGAAAGCTATTCTCTGAAGTTGATTTCTGGATTTCATCAGGATATTACAAAGCCCATAAAGGATGACATATGCAAATCAATTAAAAGATGGAGGACTTCTTTTTCTGCGCTTAAATTGAAGCAAGATATTCTATGCTGTCTTTTTGACCAAATCATACATTCTGCGGATAACATAGACATTCAGGAATTATTCAAGCATCTTCATTCCATGGAGATGTTAGGCTTGCCGATACTAGAAGGAACCAATCCAGCATCATATTTTCCTTCTACTGTCATTGGTTATGAGGCAGCTTGCTACAGTCGTATATGGAGTGAGGTTTTTGCTGCTGATATATTCACCTCAAAGTTCTGCAACGATGTTTCAAACCAGCATGCCGGTATGCAATTCAGGAACAAGGTATTGGCCCCGGCAGGTGTGAAAGGTCCTATTGAAGTTTTATCAGACTTTCTAGGAAGAGAACCATCAATCCAAGCCTACGTTGAGAACAAAGTAAAGTATGTTTTGTAA 2097 0.4077 MGKEKKGGSLLAFTGAAAVLAIASNLVITAIKYQKEKNAKKKDLAGSKVRVNLSASEILKLADQIIANSNKVHNSVASVPLDKVTYANVISPLAELQAQQFPLIQSCVFPKLVSTQEDVRKASAEAERRIDAHLDVCSKREDVYLVIKAFAVRREWMNAEAKRFVQILVRDFERNGLNLTASKREELQRLRAQIDELSFKYIQNLNDDSRFLLFNEEELAGLPPEFLKGLDKSENGKLKISLRSHHVAAVLEFCKVGTTRRMVSGAYGNRCGEINVSILESLVQQRHKYARLLGYSCYAEYAIDVRMAKTPKKVFEFLKEISTSLTDLAMKELDILKDLKKKEEGEIPFGIQDLLYYVKRVEELGYDLDFGEIKQYLPISVVLSGIFKIVQDLFGLRFEEIVGADVWHCDVRVFSVLDLGSSELLGYCYLDLFSREGKYGHTCVLALQNSALTISGAQQIPVALLISQCQKDADGSSGLLRFSEVVSLFHEFGHVVQQICNRASFARISGLCVDPDFVEIPAQLLENWCYESYSLKLISGFHQDITKPIKDDICKSIKRWRTSFSALKLKQDILCCLFDQIIHSADNIDIQELFKHLHSMEMLGLPILEGTNPASYFPSTVIGYEAACYSRIWSEVFAADIFTSKFCNDVSNQHAGMQFRNKVLAPAGVKGPIEVLSDFLGREPSIQAYVENKVKYVL 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1782 698 Gene3D Neurolysin, domain 3 184 690 IPR024077 -
Ssu9g1782 698 Gene3D Collagenase (Catalytic Domain) 378 528 IPR024079 GO:0008237
Ssu9g1782 698 Coils Coil 180 200 - -
Ssu9g1782 698 PANTHER SACCHAROLYSIN 37 695 - -
Ssu9g1782 698 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 52 691 - -
Ssu9g1782 698 Pfam Peptidase family M3 254 691 IPR001567 GO:0004222|GO:0006508
Ssu9g1782 698 PANTHER PROTEASE M3 THIMET OLIGOPEPTIDASE-RELATED 37 695 IPR045090 GO:0004222|GO:0006508
Ssu9g1782 698 CDD M3A_TOP 59 691 - -
Ssu9g1782 698 Gene3D Endopeptidase. Chain P; domain 1 27 174 IPR024080 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1782 Ssu-Chr9 55117625 55128052 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1782 K01392 - gmx:100793518 1281.93