Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1778 ATGGCACACGCTCTATCCTCTAATCTGGCTCTTAACCTTCCCACACCGAGGTATGTTCGCCCCGCGAGATCAACCCAGTTGAAGCCCGTGAGGGTCATGATGGGAGATGCAAGAGAAAAGCTTGACCACGTGCCAAGACACAACAACAAGCACCGCCCCCTCCCCAAAAAGAAACTTGCCCCTACCGCACCCGTAGGGTTGTGGGACCGGTTTCCTACGGCAAGGACAATGCAAGAGATGATGGAAACGATGGAGAGGATGATGGAGGACCCGTTTGCGTTTAGCACACTTGGGTGGCCTTCATCTCCCCTCCCAAGTGAGGGAGTGGGTGGGTATGGAAGAAGGGGAAGGGCACCGTGGGAGATTAAAGAGGGAGAGGGTGAGTACAAGATGAGGTTTGATATGCCTGGGATGAACAAGGAGGATGTGAAGGTGTGGGTCGAGGAGAAGATGCTTGTGGTCAAGGCTGAGAAGGTACCTAAGAAGAAGCAAGAGATGGTGGAACAACAAGAAGAACAAGAGGAAGAGGAATGGTCTGCTAAGAGTTATGGAAAGTATAGCAGTAGGATTGCTTTGCCGGATAATGTGCAGTTTGAGAATATTAAGGCAGAGGTTAAGGATGGTGTGCTCTACATAACCATACCCAAGTCTACAAGCTACTCAAACATCCTGGGAATCCAAGTTCAATAA 690 0.5014 MAHALSSNLALNLPTPRYVRPARSTQLKPVRVMMGDAREKLDHVPRHNNKHRPLPKKKLAPTAPVGLWDRFPTARTMQEMMETMERMMEDPFAFSTLGWPSSPLPSEGVGGYGRRGRAPWEIKEGEGEYKMRFDMPGMNKEDVKVWVEEKMLVVKAEKVPKKKQEMVEQQEEQEEEEWSAKSYGKYSSRIALPDNVQFENIKAEVKDGVLYITIPKSTSYSNILGIQVQ 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1778 229 PANTHER 26.5 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 25 229 IPR044587 GO:0009408
Ssu9g1778 229 PANTHER 26.5 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 25 229 - -
Ssu9g1778 229 Pfam Hsp20/alpha crystallin family 121 220 IPR002068 -
Ssu9g1778 229 SUPERFAMILY HSP20-like chaperones 106 218 IPR008978 -
Ssu9g1778 229 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 111 229 IPR002068 -
Ssu9g1778 229 Gene3D - 66 227 IPR008978 -
Ssu9g1778 229 CDD ACD_sHsps-like 121 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1778 Ssu-Chr9 55080641 55081992 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1778 K13993 - gmx:100811966 349.747