Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1771 ATGGCAATGATTCCGTACCACCTTTCCCGTTTACCTTACCACGATTCCCTCAAAGCACTGGAGGCTGATATACAGCACGCCAATGCTTTGGCTGCTGCAATTCCCGGAGCCAAGGGTGGGACTCTTCTTCAAATGAAATTGGTTTACAATCACTTGGCTCCTCTCTTCCTGTTATTTCTACAGTGGATAGATTGTTCTTGTGCAGGCTTTCTCCATAGATATCTCAACCTCTTCCACATACTTATATACAAGGTGCACAATGATGGTAGATCAATCATGTCTACTCATGGAAGGAAGGCTACCATTGCGGACTTTTATGCCGTTATATTGCCCTCTCTCCAGCGGCTTCATGGTAGTTTGGAGAAGCTAGAGGTTGCTGAAGAAGGGACATCTTCAAGTTATGGCAAGAAGGTGATTGAAGAAGGTGGGAAACTGACCAATGTTGATTTGCAAAGAGAAGATGAATGTGGGATTTGCTTAGAGCCTTGCACCAAAATGGTTTTACCTGGTTGCTGCCATGCCATGTGTATTAAATGCTACCGCAAGTGGAACCGAAAGTCAGAGTCTTGTCCTTTTTGCCGTGGTAGCTTGAGGAGAGTTAATTCGGAGGATCTATGGGTATTAACTTGTAATGATGATGTTGTTGATGCTGAAACAGTTTCTAAGGAGGACTTGTTGCGTTTTTATCTCTATATCAACAAGCTGCCTAAAGATCACCCAGATGCACTTTTCCTAATGTATTATGAATACCtcatttaa 759 0.4282 MAMIPYHLSRLPYHDSLKALEADIQHANALAAAIPGAKGGTLLQMKLVYNHLAPLFLLFLQWIDCSCAGFLHRYLNLFHILIYKVHNDGRSIMSTHGRKATIADFYAVILPSLQRLHGSLEKLEVAEEGTSSSYGKKVIEEGGKLTNVDLQREDECGICLEPCTKMVLPGCCHAMCIKCYRKWNRKSESCPFCRGSLRRVNSEDLWVLTCNDDVVDAETVSKEDLLRFYLYINKLPKDHPDALFLMYYEYLI 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1771 252 ProSiteProfiles Zinc finger RING-type profile. 156 194 IPR001841 -
Ssu9g1771 252 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 6 252 - -
Ssu9g1771 252 Pfam Ring finger domain 154 194 IPR001841 -
Ssu9g1771 252 ProSitePatterns Zinc finger RING-type signature. 171 180 IPR017907 -
Ssu9g1771 252 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 128 205 IPR013083 -
Ssu9g1771 252 SUPERFAMILY RING/U-box 147 198 - -
Ssu9g1771 252 PANTHER RING FINGER PROTEIN 41, 151 6 252 - -
Ssu9g1771 252 SMART ring_2 156 193 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1771 Ssu-Chr9 55025017 55026416 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1771 - - gmx:100812518 484.952