Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1770 ATGTCTGTGAATCACGTAGCAGAGCAGCTTTCGGATTCGGGTCATCGTGTGGGGCACGACCAATCAAATGTGGATACCGAATCAAACACTGATGCTCATCAAGATCAGGGAGAGCGTGCTGATCTCAAAGATCCTGAAGATGGAAAATCTACAGAGGATACTGCCAGAGATGACATGTTTGTTGATTGCCCTGATGAGTTAACCACATTTGATGGAAggcaaaaggaagaagaagttGCAGCTGTGGAAAATGAAGATGACAGGGCGGAGGAAAATCAAGTTATGCATCAACAGCACAGTCATTTTGTTGAATTGGGCAATGGAGTGGGAGATGCTTACTCCCCAGGCCAGCTGGAGAAAGCTGTTGCTGACAAAGAAATTATTGTGCAGGAATACCAGGAAGAAAGACAAGCTGTTACTCAAGGAGTGCTTGATCTTCATTGTCAGCTAAAGACTCTCACTGGTCAACAGAATGAAGCTGAGGTTGGAGATAGGGAAGTGACTGATGTTCCATTGAGGGAGATGATAAAAGAATGTTTGGAGTTTGTGAAAACTGCCTCAGATGAATGGTCAAACAGTGAAACCACTATAAGTAATCTTCGTGAACATCTATCTATGAAGGATCGTGAGATAGAGGATCTTAATGCAAAGCTTGCCCGATTAACAGTATCTAATGAAAGTTTGCAGGTTTCATCTGAAGCTCAGCTTGAAAAGGATCGTAATGTTGAGATTGCGATAGATAAGACTATATCCTCTCTTGCAACAGTTGTTACTCGAGGACAAGTATTGGATGATTCTATTAGCGggaaaatagtttatattgaGGAAGGCACTACACATTTAATTGAAAAGTATAATCAGATTCTTTCTGAAATTTATCAACTTGGGCAATCTTTCTCTGAGGTAGGCTTGGATACTAAAGATCAGGAATATGGGAACATACTTGCTGATGCTCATGGTGGGTTACTGGAGCTCAAAAGAAAGGAAACAGAATTGGTTGAAAAACTGGCTCAGTTAGAAGATGAAAACCGGAAACTGGTTGACGAGCTTGACAAGGAAAAGGCAATGATAGGGACATTAAATACTGAACTTGGAAATCTGAAAATAGAACTTGAGCAGGAAAAGGTTAAATGTGCTAATACCAAAGAAAAGCTTAGTATGGCTGTGACAAAAGGAAAGGCATTGGTACAGCAGCGAGATTCATTAAAGATGTCTCTGGCTGATAAATCCAGTGAGCTTGAGAAATGTTCGATTGAATTGCAAGAGAAGTTAGTTGCACTACAAGCTGCTGAACTTGCTAAGGAGGAGCTGGCCCAAAGTGAAAATATGGTTACATCCCTGCATAACTCATTACAGGAAAAGAATGCAATTTTTGATCAAGTGGAAGAAATCTTGTCTCATGCCAAACCTGATGAACATGAAATTTTTGATATGCCAGAGAGACTAAGATGGCTTGTGGATGAAAGAAATACACTGAAGGATGCCTTCCTAGAGTTATGCAAGTTGAAGGAAGTTCTATCTCTAGTGGACCTACCAGAGCCTGTTTCATCATCTGATTTGGAATCACAAATGAATTGGCTTACGGATTCTTTTCTTAGGGTCCGGGATGATATGCATACTCTACAGGAAGAAATTTCCACAATCAAGGAAGCATCTGATAATTATATTGATCGGCTGAGTGTTTCTCTTTTGCTGGAATTGCAGGAAAAAGATTACCTTCTGTCAGAATTATCTGATTTGAGGTTCGAATATGATGAGCTTGTTGGCAAGAACAATCAGATTTCTTTGGAGAAGGATCAGATAGTGAATATGTTAGTCGATCTTTGTGGCCTGAAGATGGAAGATGAAGGGATTGATCAAATCTCTTCCAGCACTTCTACAATCATCGATTTAtgctttcaaattataaaaggaCAGAGTGGTCCCTTCTCTAGAGCATCCCATATTGATGCTGAGTTGCTTGAAAGGATTCAAAGTCTCTTGTATGTTAGAGATCAGGGATTAATGCTCTATGAAGATATACTGGAAGAAGAGATGCTAATTAGATCAGATGTGAGTAAGCTGTCAAATGAGTTGAAAGTTACATCTGAGGAAATTATAGCACTGAAAGAAGAAAGGAGTTCTCTGCTGCAAGATCTTGAACGATCTGAGGAGAAGACTGCCATGCTTAGGGATAAGTTGTCCATGGCAGTTAAAAAAGGAAAGGGGCTGGTTCAAGATAGGGACAATCTAAAAGGTCTTCTTAATGAAAAGAACTCAGAGATTGAGCAGTTAAAGGTTGATTTGCAGAAGCAAGAATCTGCAGTTTCTGAATACAGGGATGAGATCAACAGATTGTCCAGTGATGTGCAAAGCATGCCGAAGCTGGAGGCTGATCTTCTGGAAATGAAAATGGAGAGGAATCAGTTTGAGCAGTTCTTAATGGAGAGCAATAACATGTTACAGAAAGTGATGGAGTGTATTGATGGTATCATTCTTCCAGTTGATCCAGTTTTTGATGAACCAATAGAAAAGGTGAAGTGGCTTGCTGGTTATGTCGGTGAATGCCAAGATGCTAAGGTACATGTAGAACAAGAGTTGCAGCTAGTGAAGGAGAAGATCAGTGTACTTGAAATTAAATTGGCAGAAGCCCAAGCAACTGTAAAATCCCTTGAACAGGAATTATCATCTTCAGATGACAATGTTTCTCAACTTGCTGAAGAAAAAACAGAGTTAGAACGTGGGAAAGCAAAAGTTGAGGAAGAGTTAcataaagttaaagaaaaagttgcTGAGGTTTGCAGTACTACTAAGTCACTTGAAGATGCCTTATCACAAGCAGAGAAAGATGTTTCTATTCTTTCCAAAGAGAAAGAGCAGGCTCAAGTTAGTAGAGTTGCTGCAGAGAGAGAGTTAGAGAGTGTTAAAGATGAAGCTGCCAAGCAAACAAGCAAACTGGCAGAGGCCAGCAGGACCATAAAGGATCTAGAAGATAAACTATCTAAGGTTGAGGGTAATGTCAATTTATTGACTGAAAAGTATAATGCTGATCAAGTTGTGAAGATTGACATGGAAAATGAATTGGAGAAGCTGCAAGATGAAGCTGCAAATCATGCTAGCAAATTGGCAGGTGCCTCTGCAACTATAAAATCACTGGAGGATGCATTATCAAAGGCGCAAGATGATATTTCTGCCTTAGAAGATGcaaataaaattgcaaaacaGGAGATATCTTCACTTGGTTTAAAGTTAAATTCATGCATGGACGAGTTAGCTGGAAAGAATGGAAGCTTAGAAAACAGGTCCTTACAGCTCATTGGACTCCTTAATGATCTTCAGGTGCTCATGAAAGACACTACTCTATTTCCTAGAATAAAACAATGCTTTAAGAGGAAAGGTGAGACCCTGAAGAAAATGAATCTCATTCTGAACAAAGTAAGAGATAACGTTGCCATGACTGCAAGTGATTCAAAAGTACAGCTTGTGATAGAGGAAAATCCACTTGTGAGAAAAACATTCTTGGATGGCCctgaaaattttgaagttgaaCTGGACAATACAGAGATTGATGATGCTGATATTGACACCATAATCTCATCATTTGGAAAGATTGTGAAAGGATTTCAGTTGAGAAACAAACACATTGCAGATAAGTTTGATGAATTTTCGGATTGTATGGATGAGTTAATTTCTCCTCTCCATGAAAAACTACTGGAAACTGAGGCCATCTCAACTACTGCTGTTGAGAACATGGAAATTATGAAAGAAGAAGCAAATACCATGGAAAAGTTGAAAGAACAACAGGAAAATATTATTGCCACTTTAGAAAACAATATCAGTGTATTGCTATCTGCATGCACTGATTCTACCATTGCACTTGAGAGTGAAGTTGACAAGAATCTTGGGCGGCCAGGTTCTACTTCTGAGGTTGAAAAGTTAAACCTTGAAGCAGGTGCACAAGCAGAGCATCATAAGAACAGCAAATACGGGGAAGCCACACATAACTTGATGAATGCTTCTAGAAAAGCCCAAACTTTGATTAGACAGTTCGAATGTAGAAGTGAGGAGGTAGCTGCGACAATTGAAGATTTGcagaataaattgaaagaaacaaCAGTTGCTTTTGAATTAGTCACAGATGAGAGAGACTTAAATAAAAACAGAGTTTTGCAACTGGAGTCTGATATTCAATCACTGCAAAGTGCTTGCAGTGAGTTTAAGGATAAGTTAGAGGGTTATCATGCCCTAGAAgaaaaattggagaaaaaagAGGCTGAGATTTCATCAATGCACAGTGCTTTGTTGGCAAAAGaagAAAGCTCCCTCCTTCCAGCGTCTCAGATGAGAGATCTCTTTGACAAGATAGATAGGATCAAAATCCCAATTGTAGAGTCTGAAGAAGATGATTTGGAGCCACATACTTCAGCCCCTATGAGAAAACTCTTTTACATTATTGATAGTGTTACTAGGTTGCATAATCAAATAAACTCTCTGTCTCATGATAAAGAACAGCTGCAATCAATCCTTGAAAGCAAGGATCTTGAAATTAAGGATCTGAAGGAGAAAGTCAAACAACTCAATAGAAACTATGAAGACTCAAAAATGATCAAGAATGAATTGTCTGAGCTCTCCTATGTGttagaaaaaattatggatATTTTGGGAGCCAGTGAATGGGTTGTAGATAGAAAATCTAAAGGTGTGAAGGAATTAATATCAGCATTGGAAAAGCATATCATTGCCATTCTTTCAGAATCTGAAAATTCAAAATCCAAGGCCCAGGAACTTGATATTAAGTTAGTTGGAAGTCAGAAGGTTATTGATGAATTAACAACCAAGGTTAAAGTACTTGAAGATTCACTCCAAGATAGGACTTCTCAGCCAGACATTGTCCAGGAGAGGAGCATATATGAAGCACCCTCATTACCTGCTGGGTCTGAGATAATTGAAGTTGAAGAGGGATCATCACTTGGCAAGAAAGCAATATCTCCTGTCCCACCGGCTGCTCACGTGAGGAATATGAGAAAAGGATCTGCTGATCATCTTGCACTTGATATTGATGTGGAGTCTGATAATTTGATTAACAGGGCAGATACGGATGATGATAAAGGTCATGTATTCAAGTCTCTGAACACTTCTGGATTTGTACCGAAACAAGGAAAGCTCATTGCAGATCGTATTGATGGACTCTGGGTATCTGGTGGTCGGGTTCTCATGAGTCGTCCTAGAGCAAGATTAGGACTTATTGGTTATTTGCTTATCTTGCATATATGGCTACTGGGGACGATCTTGTAG 5274 0.3836 MSVNHVAEQLSDSGHRVGHDQSNVDTESNTDAHQDQGERADLKDPEDGKSTEDTARDDMFVDCPDELTTFDGRQKEEEVAAVENEDDRAEENQVMHQQHSHFVELGNGVGDAYSPGQLEKAVADKEIIVQEYQEERQAVTQGVLDLHCQLKTLTGQQNEAEVGDREVTDVPLREMIKECLEFVKTASDEWSNSETTISNLREHLSMKDREIEDLNAKLARLTVSNESLQVSSEAQLEKDRNVEIAIDKTISSLATVVTRGQVLDDSISGKIVYIEEGTTHLIEKYNQILSEIYQLGQSFSEVGLDTKDQEYGNILADAHGGLLELKRKETELVEKLAQLEDENRKLVDELDKEKAMIGTLNTELGNLKIELEQEKVKCANTKEKLSMAVTKGKALVQQRDSLKMSLADKSSELEKCSIELQEKLVALQAAELAKEELAQSENMVTSLHNSLQEKNAIFDQVEEILSHAKPDEHEIFDMPERLRWLVDERNTLKDAFLELCKLKEVLSLVDLPEPVSSSDLESQMNWLTDSFLRVRDDMHTLQEEISTIKEASDNYIDRLSVSLLLELQEKDYLLSELSDLRFEYDELVGKNNQISLEKDQIVNMLVDLCGLKMEDEGIDQISSSTSTIIDLCFQIIKGQSGPFSRASHIDAELLERIQSLLYVRDQGLMLYEDILEEEMLIRSDVSKLSNELKVTSEEIIALKEERSSLLQDLERSEEKTAMLRDKLSMAVKKGKGLVQDRDNLKGLLNEKNSEIEQLKVDLQKQESAVSEYRDEINRLSSDVQSMPKLEADLLEMKMERNQFEQFLMESNNMLQKVMECIDGIILPVDPVFDEPIEKVKWLAGYVGECQDAKVHVEQELQLVKEKISVLEIKLAEAQATVKSLEQELSSSDDNVSQLAEEKTELERGKAKVEEELHKVKEKVAEVCSTTKSLEDALSQAEKDVSILSKEKEQAQVSRVAAERELESVKDEAAKQTSKLAEASRTIKDLEDKLSKVEGNVNLLTEKYNADQVVKIDMENELEKLQDEAANHASKLAGASATIKSLEDALSKAQDDISALEDANKIAKQEISSLGLKLNSCMDELAGKNGSLENRSLQLIGLLNDLQVLMKDTTLFPRIKQCFKRKGETLKKMNLILNKVRDNVAMTASDSKVQLVIEENPLVRKTFLDGPENFEVELDNTEIDDADIDTIISSFGKIVKGFQLRNKHIADKFDEFSDCMDELISPLHEKLLETEAISTTAVENMEIMKEEANTMEKLKEQQENIIATLENNISVLLSACTDSTIALESEVDKNLGRPGSTSEVEKLNLEAGAQAEHHKNSKYGEATHNLMNASRKAQTLIRQFECRSEEVAATIEDLQNKLKETTVAFELVTDERDLNKNRVLQLESDIQSLQSACSEFKDKLEGYHALEEKLEKKEAEISSMHSALLAKEESSLLPASQMRDLFDKIDRIKIPIVESEEDDLEPHTSAPMRKLFYIIDSVTRLHNQINSLSHDKEQLQSILESKDLEIKDLKEKVKQLNRNYEDSKMIKNELSELSYVLEKIMDILGASEWVVDRKSKGVKELISALEKHIIAILSESENSKSKAQELDIKLVGSQKVIDELTTKVKVLEDSLQDRTSQPDIVQERSIYEAPSLPAGSEIIEVEEGSSLGKKAISPVPPAAHVRNMRKGSADHLALDIDVESDNLINRADTDDDKGHVFKSLNTSGFVPKQGKLIADRIDGLWVSGGRVLMSRPRARLGLIGYLLILHIWLLGTIL 1757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1770 1757 Coils Coil 853 922 - -
Ssu9g1770 1757 Coils Coil 1495 1536 - -
Ssu9g1770 1757 PANTHER BNAA09G28150D PROTEIN 954 1006 - -
Ssu9g1770 1757 Gene3D - 858 1014 - -
Ssu9g1770 1757 Coils Coil 72 92 - -
Ssu9g1770 1757 MobiDBLite consensus disorder prediction 1 97 - -
Ssu9g1770 1757 Coils Coil 197 231 - -
Ssu9g1770 1757 PANTHER - 908 958 - -
Ssu9g1770 1757 MobiDBLite consensus disorder prediction 31 97 - -
Ssu9g1770 1757 Coils Coil 685 719 - -
Ssu9g1770 1757 Coils Coil 741 782 - -
Ssu9g1770 1757 Coils Coil 1382 1426 - -
Ssu9g1770 1757 Coils Coil 1340 1374 - -
Ssu9g1770 1757 Coils Coil 1600 1620 - -
Ssu9g1770 1757 PANTHER BNAA09G28150D PROTEIN 40 907 - -
Ssu9g1770 1757 PANTHER BNAA09G28150D PROTEIN 1068 1757 - -
Ssu9g1770 1757 Coils Coil 322 356 - -
Ssu9g1770 1757 Coils Coil 1243 1278 - -
Ssu9g1770 1757 MobiDBLite consensus disorder prediction 890 909 - -
Ssu9g1770 1757 PANTHER - 954 1006 - -
Ssu9g1770 1757 PANTHER - 40 907 - -
Ssu9g1770 1757 PANTHER - 1011 1063 - -
Ssu9g1770 1757 PANTHER - 1068 1757 - -
Ssu9g1770 1757 PANTHER BNAA09G28150D PROTEIN 908 958 - -
Ssu9g1770 1757 PANTHER BNAA09G28150D PROTEIN 1011 1063 - -
Ssu9g1770 1757 SUPERFAMILY Tropomyosin 833 1078 - -
Ssu9g1770 1757 Coils Coil 364 384 - -
Ssu9g1770 1757 Coils Coil 930 1069 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1770 Ssu-Chr9 55015669 55022950 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1770 - - gmx:100799016 2847.38