Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1757 ATGAATCCTCTGTGCTGCATTGCTCCGGTATCGATCGATCGGGAGCGGGCGAACCCTGTGGTGGCGAAATCGCCGGGTCAGTGCCAGTTAGGGCTCGATGCGTCGGTCAGGACGGTGAACTGCGCTTCCAAATCGAGTTTCTCGACGCAGGATTCGTCGGTCGGGGGGGATTCCGTGAAGGCCTCCGCCGCGGCGGCGGCGAAtctggaggaggaggaggaggcgCGCGATTCGAAGGTGTTTGCCGGCGGGAATGGCGGCGGAGTGGCCGGCAGCGTGGCCGGGATCCTGTACAAGTGGGTGAATTACGGGAAGGGGTGGAGGTCGAGGTGGTTCGTGCTGGAAGATGGCGTGCTCTCGTATTACAAGATTCACGGACCGGACAAGATCTTGATGAGTCCGGCGAGGGATAGGAGCGTGAGGGTGATCGGGGATGAGTCGTCGAAGTATGTGAAGAAGGCGAATTGGAACCTGAATCAAGTGCCTTCTGGAGGAGGTAACAGTAACAACGGGAAGCAATGCAAGCCCTTCGGTGAGATACATTTGAAGGTTTCCTCAGTTCGTTCCAGCAAGTCTGATGATAAGCGGCTTTCCATATTTACTGGGACAAAAACTCTTCACTTGCAGTGTGTATCTAGAGAAGACAGAGCCATGTGGATTGAGGCCTTGCAGTCTGCAAAAGATCTTTTTCCTAGAGCTCTAACAAGTAGCGATCTTGCAACCTTCAGAAGATATTGTAGTTTCGACCGAGAAGCTGCGATCACGATTGTCACAGGAAGGCATAAATGA 789 0.5247 MNPLCCIAPVSIDRERANPVVAKSPGQCQLGLDASVRTVNCASKSSFSTQDSSVGGDSVKASAAAAANLEEEEEARDSKVFAGGNGGGVAGSVAGILYKWVNYGKGWRSRWFVLEDGVLSYYKIHGPDKILMSPARDRSVRVIGDESSKYVKKANWNLNQVPSGGGNSNNGKQCKPFGEIHLKVSSVRSSKSDDKRLSIFTGTKTLHLQCVSREDRAMWIEALQSAKDLFPRALTSSDLATFRRYCSFDREAAITIVTGRHK 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1757 262 ProSiteProfiles PH domain profile. 90 228 IPR001849 -
Ssu9g1757 262 SMART PH_update 91 230 IPR001849 -
Ssu9g1757 262 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 2 241 IPR000648 GO:0008289
Ssu9g1757 262 Pfam Pleckstrin homology domain 95 225 - -
Ssu9g1757 262 Gene3D - 90 230 IPR011993 -
Ssu9g1757 262 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED PROTEIN 1D 2 241 - -
Ssu9g1757 262 SUPERFAMILY PH domain-like 93 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1757 Ssu-Chr9 54859679 54861397 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1757 K20456 - gmx:100788779 396.356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1757 9 54859679 54861397 Ssu9g1757 9 54859679 54861397 ECH