Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1750 ATGCAACATGATATTCTTATAAAGAAGCTCCTCCTTACACACGATCCAGATGGTCGCAGGCTGGATTCTGAGACAATGCTTCTTGCTGTGGGCAACATTATGTTTCATGCTTCCACAATAATAGTGGCTTCTAATTTATATTCTGCTTCCTTTCAGAAGAATGATATAACTGAAATTGAAACGCTTGGTTGTAGTGAACCAGTAGGATTCATCATCACAAAAATATGCAAGAAACTCTGCAAATGTTCTGGTGAAGGTGATATCAACTCAAGGATCATGagtttgtttgatttgataGGGAAGTATAGCTGGGATGCAAAAGTAGTTTTAGTGCTTGCTGCTTTTGCTGTAAGATATGGTGAATTCTGGCAACTTAGGCAGCTACATCGTGGCAATACTTTGGCAGGTTTAATTTCAAGTATTAGGCAGCTGCCCTACAACTTAAAGCCACTGAAGCTACAAATCAAGGCATTGAGCTTGTTGGTTAAGACCATGATGGATGTGGCTATGTGTATCATTAAGTTTGAATACCTGCCCCTTCAACATGTAGAGCCgggaaataatatatttattgtcacAAAGTCTCAAATATACGAAGCTGCATATTGGATCACCAGAAGCAGTTTAGCATGTTTTTCTCAAGTCATGGATTTCACAGCCAAGAAAAGAAACATGAGCAAGTGCATGTTGCTTCCCTTGAGGTTTTCGGATTCAACAATAATTGCTACTTGGGAGCTTTCAAGCTTGGCGTATAGATTAAGTGACATATGCAGCAATCTCGGAAGACAGGTGCATCTGTGTCACGAAGAAATAGAGAGAAACTTGTATGACAGGCTGTTGGATCTTGCTCACGAGGAACACATTGATAATCAGAAGATTCtcactttattttttccttccaaGAATTACTTGCCATTGAAGGATTGCTCAACAGAAGTAAAGGTTGGTGTGTctgaactaaaaaataagatagttTTGTTGTTGATCTCAAAACCGCAGCTACTCAACCCAGTAGATATATTCTTGCTGGTCCAGCAAACATGTGATCATCCTCTGAGTGAGAGGTTGAGGGAGAGTTATAAGATTGTGTGGATTCCCCTTGCATCTTCTGATTCATGGACTGATGCTGAAGAGAGTAGTTTTAATTTTCTGTCAGATTCCTTGCCTTGGCATGCTGTTCGGAAACCAAGGTTACTTAGCTCAGCAGTGGTGAAGCACATAAGGGAACAATGGAACTACAAGGATGAGCCCATCATGGTAGCTCTAGATTCAAAAGGGAAGGTCACAAATCACAATGCTCTTGATATGATCAAGATTTGGGGAGCCCAAGCTTATCCTTTTTCAGCATCAAAAGAGGAAGAGCTATGGCAAGACCAGAATTTGACAATGCAACTTTTGCTGGATGACATCAATCCTCTACTTGCTTACTGGGTTGAACAAGGCAAAAATATTTGCCTTTATGGCAGTGAAAACTTGGATTGGGTCCAACAATTCAATGATGAGACAACTGAACTCAAACGAGCAGGTCTGCAGCTGGAAACGATATATGTTGGTCTTAGTCATTTAGGTGAACGTGTAAAGCAAATAATGGCAAGAAGTGGTGAAACAAGTCTCAGTGATCCACTTTCCTTGACAAATGTGCAATTCTTTTGGCTTCGGTTGGAGAGTATGAGAAGGTCTAAATTGAGACTAGGGAAGACACCAAGTTCTGATCATGTACTAGCAGAGTTGTCGGCTTTGCTTGACATGGATGATAGAGAGGAAGGTTGGGCAGTGATTGGAAGTAGGGGTTCAACTGAAGTTATTAGGCATCAAGGGATGCAGGTGGTGGAATTCTTAAGGAACTATTCTGagtggaaagaaaatataaccGAGTTTGGATTGTTGGGTGCTCCAAGAAACTTCCTAGAGCCTGATTCCGTTGCTGGGAGTTGCACTCACTCTTACTTTGTTCCctcaagagaaaatgaaagactAAGTCAAGGAACTTTAATTTGTCAAGCGTGCAAGCGTCCCATGAAGAAGTTTGTGGTGTACCAGCCATAA 2046 0.392 MQHDILIKKLLLTHDPDGRRLDSETMLLAVGNIMFHASTIIVASNLYSASFQKNDITEIETLGCSEPVGFIITKICKKLCKCSGEGDINSRIMSLFDLIGKYSWDAKVVLVLAAFAVRYGEFWQLRQLHRGNTLAGLISSIRQLPYNLKPLKLQIKALSLLVKTMMDVAMCIIKFEYLPLQHVEPGNNIFIVTKSQIYEAAYWITRSSLACFSQVMDFTAKKRNMSKCMLLPLRFSDSTIIATWELSSLAYRLSDICSNLGRQVHLCHEEIERNLYDRLLDLAHEEHIDNQKILTLFFPSKNYLPLKDCSTEVKVGVSELKNKIVLLLISKPQLLNPVDIFLLVQQTCDHPLSERLRESYKIVWIPLASSDSWTDAEESSFNFLSDSLPWHAVRKPRLLSSAVVKHIREQWNYKDEPIMVALDSKGKVTNHNALDMIKIWGAQAYPFSASKEEELWQDQNLTMQLLLDDINPLLAYWVEQGKNICLYGSENLDWVQQFNDETTELKRAGLQLETIYVGLSHLGERVKQIMARSGETSLSDPLSLTNVQFFWLRLESMRRSKLRLGKTPSSDHVLAELSALLDMDDREEGWAVIGSRGSTEVIRHQGMQVVEFLRNYSEWKENITEFGLLGAPRNFLEPDSVAGSCTHSYFVPSRENERLSQGTLICQACKRPMKKFVVYQP 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1750 681 Pfam Sieve element occlusion C-terminus 450 680 IPR027944 -
Ssu9g1750 681 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION C 2 680 - -
Ssu9g1750 681 Pfam Sieve element occlusion N-terminus 3 286 IPR027942 -
Ssu9g1750 681 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE 2 680 IPR039299 GO:0010088
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1750 Ssu-Chr9 54790835 54794343 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1750 - - gmx:100819823 1135.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1750 9 54790835 54794343 Ssu9g1750 9 54790835 54794343 ECH