Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1745 ATGGCGGAGCTCCGGCACTCCTCCTCCCTCGGCAGCCGAGCCACTTCTTCTCCGATGAAGCGCGACGCCGCCGCCGTGGGCGATTCTTCCCCTTTCATTCCAGACAACCACCTCGCCGACGACGACGAGCACGATCGCCACTCCTCCAAGGACCGCGACCGCCACCTCTGCTCCTTCTTCACCGACGACCCTAGGGTTTCGCCTTATAACTCCAGGATCTCTCTGTTTTTCACCGTGCTTCTTCTTCTCGTCGGTTTAGTCTCCGTATTCACAATCTTCCATAAACTCAATGCCCCTTACTTGTGTAAAAAAGATGGGATTACTCTTCACTGCCCACATgttaaagAATCGCCATCTCTTTGGGAAAATCCTTTCTCATCCACAACATCTTGGAAGCCCTGTGCGGAGCGCCGGGATGGTGTTTTATCAGAACTTCCTCCTGAAAATGAAACAAATGGCTATATATTCATCCATGCTGAAGGTGGTCTAAATCAGCAAAGAATTGCGATATGCAATGCAGTGGCTGTGGCAAAAATAATGAATGCCACTCTTATTTTACCTGTTTTGAAGCAGGATCAGATTTGGAAAGACCAAACGAAATTTGAAGACATTTTTGATGTGGATCACTTCATTGACTACCTGAAGTATGATGTTCGTATTGTCCGTGATATCCCAGAATGGTTTACTGATAAATCAGAGCTATTTACTAGCATAAGACGGACTGTAAAAAACATTCCTAAATATGCACCGGCACAATTTTACATCGATAATGTTCTGCCCCGAATCAAGGAGAAGAAGATTATGGCTCTGAAACCGTTTGTTGACAGACTGGGATATGACAATGTTCCTCCTGAAATCAACAAGTTGAGATGTAGGGTCAATTATCATGCTCTGAAATTTCTTCCTGATATAGATCATATGGCTGATTTACTAGCATCAAGGATGAGAAACCGAACAGGCAGTTCTAATCCTTATATGGCTCTGCATCTTAGATTTGAGAAAGGAATGGTGGGACTATCATTCTGTGATTTTGTGGGGACAAGAGAGGAGAAAGCTAAAATGGCTGAGTATAGAAAAAAGGAATGGCCTCGACGGTACAAGAATGGTTCCCATCTGTGGCAGTTGGCTCTGCAGAAGCGAAAGGAAGGACGATGTCCTCTAGAACCTGGAGAAGTGGCTGTTATTCTTCGGGCTATGGGCTATCCAAAGGAAACTCAAATTTACGTTGCTTCTGGACAGGTGTATGGTGGACAGAACCGGATGGCTCCACTGAGGAATATGTTCCCTAATCTGGTTACCAAGGAGGAGTTGGCAACTAAAGAGGAGTTAGATGGTTTCAGAAAGCATGTGACAAGCCTAGCAGCTCTTGACTTCTTGGTGTGCTTGAAGTCAGATGTATTCGTGATGACCCATGGAGGCAACTTTGCTAAGCTGATCATTGGGGCACGTAGATACATGGGTCACCGTCTAAAATCAATTAAGCCTGACAAAGGGCTAATGTCCAAGTCTTTTGGGGATCCATACATGGGTTGGGCTACTTTTGTAGAAGATGTTGTTGTTACTCACCAGACACGGACGGGATTGCCAGAAGAGACTTTCCCTAATTACGACCTCTGGGAGAACCCTCTGACTCCTTGCATGTGTAGAGCCTGA 1653 0.4555 MAELRHSSSLGSRATSSPMKRDAAAVGDSSPFIPDNHLADDDEHDRHSSKDRDRHLCSFFTDDPRVSPYNSRISLFFTVLLLLVGLVSVFTIFHKLNAPYLCKKDGITLHCPHVKESPSLWENPFSSTTSWKPCAERRDGVLSELPPENETNGYIFIHAEGGLNQQRIAICNAVAVAKIMNATLILPVLKQDQIWKDQTKFEDIFDVDHFIDYLKYDVRIVRDIPEWFTDKSELFTSIRRTVKNIPKYAPAQFYIDNVLPRIKEKKIMALKPFVDRLGYDNVPPEINKLRCRVNYHALKFLPDIDHMADLLASRMRNRTGSSNPYMALHLRFEKGMVGLSFCDFVGTREEKAKMAEYRKKEWPRRYKNGSHLWQLALQKRKEGRCPLEPGEVAVILRAMGYPKETQIYVASGQVYGGQNRMAPLRNMFPNLVTKEELATKEELDGFRKHVTSLAALDFLVCLKSDVFVMTHGGNFAKLIIGARRYMGHRLKSIKPDKGLMSKSFGDPYMGWATFVEDVVVTHQTRTGLPEETFPNYDLWENPLTPCMCRA 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1745 550 Gene3D - 295 493 - -
Ssu9g1745 550 Pfam GDP-fucose protein O-fucosyltransferase 154 486 IPR019378 -
Ssu9g1745 550 PANTHER PROTEIN PECTIC ARABINOGALACTAN SYNTHESIS-RELATED 1 550 - -
Ssu9g1745 550 CDD O-FucT_plant 154 489 IPR024709 -
Ssu9g1745 550 PANTHER O-FUCOSYLTRANSFERASE 2-RELATED 1 550 - -
Ssu9g1745 550 MobiDBLite consensus disorder prediction 35 50 - -
Ssu9g1745 550 PIRSF UCP009360 35 550 IPR024709 -
Ssu9g1745 550 MobiDBLite consensus disorder prediction 1 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1745 Ssu-Chr9 54726173 54732241 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1745 120 549 Miscellaneous Gene Families AT1G22460 35.920 5.86e-94 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1745 - - gmx:100809112 1084.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1745 9 54726173 54732241 Ssu9g1745 9 54726173 54732241 ECH