Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1700 ATGGATTCGGGCAACAGTGGGAGTATGCAATCCTCCAGCACCGCCGGTGACGAAGAGTACGATTCACGCGCCGAGTCATCAATCTCCGCGttcctcaacaacaacaacaacaaccccGTTCCGCCACCACAACCAACGGCGTTAACCCACGTTGGTCCCTTCGCTACCCAGCACCACCACACCCACGTGTTCGACCCTTTATCCAATTACTTGGATCCGACACAAAGATCGCAGTTACACCCCAACCATATCCTTAACCTCGACATGGTGTGGTCCAAGGTTGCCAGATCCGAACCCGATCTCGGCGGCGGCTTGATACCTTGCTCTTCGTCTTCTTccccacacaacaacaacaacaaccaagcTTTTCTGTTAACTCAGTTGGGAGGAGGTCAAAGTCAAACGCGAGGAGGAGGCGTTGCTGTTGCTGTTCCTGCTAGTGCTTTTCCCACCACTCTCCCTCCGGAAAGTGCTTCTCCACGAGGAGGATTACTTTCGGTGTCAGCCGCCAATGAACAAAACAGcaccaacaccaacaccaacaccaaCGTGGTTCGAAACCCGAAGAAGAGGTCAAGAGCTTCTAGGCGTGCACCTACCACTGTGCTCACTACGGACACCACCAATTTCCGAGCCATGGTTCAGGAATTCACTGGCATCCCAGCACCACCCTTCACTTCCTCGCCTTTCCCGAGAACCAGGTTGGATCTCTTTACCTCTTCTTCAGCCATAAGATCCGCTTCCACTCATTTAGACcctccaacaacaacaacaccaccCCCTTACCTTCTTCGCCCCTTCGCGCAGAAAGTTCAGGCTCTACCTTCTTCAATCCCTGCACCCTCTTCCTTTCCACCCATGTTAGACACCTTAGCTTCTAACAGTTCACCTAATAATAACTACCCTCTCAGCATGCACAACCCAATTCTCAGCCTCCAATCCATCCTCCAACCACCCCCAAAGTACCCTTCTCTTCTCGTTGGTTCCAaaactcaacaacaacaacaacaaccctCCTTGGAAACTCCGCCTAGTGGTGTTGACTCGCACCTCAAGATGGGTGGGTTGGAGGAATTAGGATTGAGCCATTCGCACGTTGGTGGTCATCATCAGAACATGGTTTCGTCTTCATCGGATGGAGCATCATTGTCGAGGGtcaacaacaacataaacaGCAACATGCGCGGTCCTTCCTCAGCGGACTGGGCCCAGGCCCAAAGAATTGGCAACAATGAAGGAGGGGTTTTGAGGTCTCTTAGTGGCGCTCTCAACTACAGAAGTAATGTTCCGGATCAGCGAGTTTCGAACGGAAAGGTTAACTTCTCGAGTGCTCCCTCGGATTTTCACGGAGACAAGGGACCGGACTGTGCTGTGGCTGCAAGAAGCGAAGAGAATGTACAATGTGCAGCATAG 1413 0.4713 MDSGNSGSMQSSSTAGDEEYDSRAESSISAFLNNNNNNPVPPPQPTALTHVGPFATQHHHTHVFDPLSNYLDPTQRSQLHPNHILNLDMVWSKVARSEPDLGGGLIPCSSSSSPHNNNNNQAFLLTQLGGGQSQTRGGGVAVAVPASAFPTTLPPESASPRGGLLSVSAANEQNSTNTNTNTNVVRNPKKRSRASRRAPTTVLTTDTTNFRAMVQEFTGIPAPPFTSSPFPRTRLDLFTSSSAIRSASTHLDPPTTTTPPPYLLRPFAQKVQALPSSIPAPSSFPPMLDTLASNSSPNNNYPLSMHNPILSLQSILQPPPKYPSLLVGSKTQQQQQQPSLETPPSGVDSHLKMGGLEELGLSHSHVGGHHQNMVSSSSDGASLSRVNNNINSNMRGPSSADWAQAQRIGNNEGGVLRSLSGALNYRSNVPDQRVSNGKVNFSSAPSDFHGDKGPDCAVAARSEENVQCAA 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1700 470 MobiDBLite consensus disorder prediction 172 200 - -
Ssu9g1700 470 PANTHER VQ MOTIF-CONTAINING PROTEIN 1 462 - -
Ssu9g1700 470 MobiDBLite consensus disorder prediction 172 188 - -
Ssu9g1700 470 MobiDBLite consensus disorder prediction 1 47 - -
Ssu9g1700 470 MobiDBLite consensus disorder prediction 326 344 - -
Ssu9g1700 470 Pfam VQ motif 197 224 IPR008889 -
Ssu9g1700 470 MobiDBLite consensus disorder prediction 1 17 - -
Ssu9g1700 470 MobiDBLite consensus disorder prediction 321 398 - -
Ssu9g1700 470 MobiDBLite consensus disorder prediction 368 398 - -
Ssu9g1700 470 PANTHER VQ MOTIF-CONTAINING PROTEIN 1 462 IPR039609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1700 Ssu-Chr9 54111555 54113509 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1700 - - vun:114182982 503.827