Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1698 ATGGCAACCCCAACGAGTCTCCTCGTCCCTCTCCTCTTTCTGCTCTCGCTATGCTTCGCCGGAACTGTTAGATCGGACGAGGATTGTGTGTACACGGTGTACGTTCGGACGGGTTCGATAATCAAGGGAGGAACCGATTCCATTATTGGGCTCAAATTATACGACAACAACGGCTACGGCATATACATCAAGAACCTCGAGGCATGGGGCGGGTTAATGGATCCGGGTCACAACTACTTCGAGCGGGGCAACCTCGACATATTCAGCGGCAGAGGGCCTTGTTTGGGCGGGCCCATTTGCGCGATGAACCTAACTTCTGACGGGTCGGGGGCCCATCACGGGTGGTATGTTAATTACGTGGAGGTCACCACCACCGGAGTGCACACACCCTGCGCTCAGCAGCAGTTCACGGTGGAGCAGTGGCTCGCTACGGACACGTCGCCCTATGAGCTCTGGGCTGTAAGAAACTACTGTAGAAACGACTTGGGCCAGGCCCGTGTCACCGACGTGGTCAGATCTCGGTCTGGGCCTAGGTCTggtttttctattttggacTCCACCGTCCGCGAGTAG 573 0.5497 MATPTSLLVPLLFLLSLCFAGTVRSDEDCVYTVYVRTGSIIKGGTDSIIGLKLYDNNGYGIYIKNLEAWGGLMDPGHNYFERGNLDIFSGRGPCLGGPICAMNLTSDGSGAHHGWYVNYVEVTTTGVHTPCAQQQFTVEQWLATDTSPYELWAVRNYCRNDLGQARVTDVVRSRSGPRSGFSILDSTVRE 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1698 190 ProSiteProfiles PLAT domain profile. 29 156 IPR001024 GO:0005515
Ssu9g1698 190 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 30 147 IPR036392 GO:0005515
Ssu9g1698 190 CDD PLAT_plant_stress 29 156 - -
Ssu9g1698 190 Pfam PLAT/LH2 domain 31 149 IPR001024 GO:0005515
Ssu9g1698 190 PANTHER - 1 189 - -
Ssu9g1698 190 PANTHER PLAT-PLANT-STRESS PROTEIN 1 189 - -
Ssu9g1698 190 Gene3D PLAT/LH2 domain 20 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1698 Ssu-Chr9 54061531 54062201 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1698 - - gmx:100793024 307.375