Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1697 ATGACGCAGCAGAATGTGGTAGTGTCTGACACCAAATCTGGAGTTTCCTTAACCGTTTTCCCAACAACATTTCAAAAGCCACCGGCGGCGCCAGGAGGGTACATTTCCATTTCAAGGAGGAGGGTTTTGAAGAACCTTGAAATCAATGGAAGCCAAAGGATCAATGCATGGGTTGAGTCCATGAGAGCCTCCTCTCCAACTCATCTTAAGTCCACACCTTCTTTGTCTCAGGAGCATAACTCTTGGATTCTTCACCATCCGTCGGCATTAGACATGTTTGACCAAATTGTTGACGCGTCAAAGGGAAAACAAATTGTCATGTTTCTGGACTATGATGGCACGCTGTCCCCTATAGTCGACGACCCTGATCGTGCTTTCATGTCTGATTCGATGAGAAAAACAGTGAGGAAACTCGCAAGGTGTTTCCCGACTGCTATAGTGACTGGCAGATGCAAAGACAAGGTATACAATTTTGTTCGATTGGCAGAGCTGTATTATGCCGGAAGCCATGGCATGGATATTAAAGGGCCAACAAGAAGCTCCAGATACAACAAAGATAGCAAACCTGAGGCAGTTCTTTTTCAACCTGCCAGTGATTTTCTTCCCATGATAGATGAGGTGTATCAACAGTTGGTTGATAAGACAAAATCAACTCCTGGAGCTAAGGTTGAGAACAACAAGTTCTGCCTTTCTGTTCATTTTCGTTGCGTTGATGAAAAGAAATGGAGTGAACTGGCACGCCAAGTGAAATCAGTTTTAAAGCACTACCCGAAGCTCCGACTTACCCAAGGAAGAAAGGTGCTAGAGATTCGTCCCACTATTAAATGGGACAAAGGGAAAGCCTTGGAATTTTTATTAGAGTCCCTTGGTTTGGCCAATTGTACTGATGTCTTTCCTGTTTATATTGGCGATGATCGATCGATGAAGACGCTTTCAAGGTATCCAAAGATCTGA 954 0.4413 MTQQNVVVSDTKSGVSLTVFPTTFQKPPAAPGGYISISRRRVLKNLEINGSQRINAWVESMRASSPTHLKSTPSLSQEHNSWILHHPSALDMFDQIVDASKGKQIVMFLDYDGTLSPIVDDPDRAFMSDSMRKTVRKLARCFPTAIVTGRCKDKVYNFVRLAELYYAGSHGMDIKGPTRSSRYNKDSKPEAVLFQPASDFLPMIDEVYQQLVDKTKSTPGAKVENNKFCLSVHFRCVDEKKWSELARQVKSVLKHYPKLRLTQGRKVLEIRPTIKWDKGKALEFLLESLGLANCTDVFPVYIGDDRSMKTLSRYPKI 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1697 317 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 1 307 - -
Ssu9g1697 317 CDD HAD_TPP 106 306 - -
Ssu9g1697 317 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 1 307 IPR044651 GO:0004805|GO:0005992
Ssu9g1697 317 Gene3D - 187 273 - -
Ssu9g1697 317 TIGRFAM T6PP: trehalose-phosphatase 103 305 IPR003337 GO:0003824|GO:0005992
Ssu9g1697 317 Pfam Trehalose-phosphatase 108 307 IPR003337 GO:0003824|GO:0005992
Ssu9g1697 317 Gene3D - 107 306 IPR023214 -
Ssu9g1697 317 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 107 305 IPR006379 -
Ssu9g1697 317 SUPERFAMILY HAD-like 106 306 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1697 Ssu-Chr9 54034291 54036565 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1697 K01087 - gmx:100794430 588.571