Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1688 ATGATTTCCATGGCCAATGCCCTACATAACGCCGCCATCTCCACAATCACGTTTGGAGACCAATATTCCATTTCTCGAAGCGTTTTTTCATCCCTGTCCACTCTTCCTCTCAGAGCCATGCAGAAAGGAAAACACGTTGAGCTGAACAGAACGGTTGTGGTGGTAAAGGCAAAGACTAGGAGTGATTTTGATGACACACACGTTGACATTTCTTTGAGCCAGAGAGTTAATGCTGTGAAACCTTCCAAAACTGTAGCCATAAGTGATCATGCCACTGCTCTTTTACAAGCTGGTGTTCCCGTTATTCGCTTAGCTGCTGGAGAACCTGATTTTGACACACCCGCTGTTATAGCTGAGGCTGGGATGAATGCTATTCGTGAAGGTTACACGAGATATACCCCCAATGCTGGAACATTAGAATTGCGCCAAGCAATTTGTCATAAGCTAAAAGAGGAGAATGGGATTACATATACTCCTGATGAGATTGTGGTCAGTAATGGAGCCAAGCAAAGTGTTGTTCAAGCAGTGCTTGCAGTTTGTTCCCCAGGAGATGAGGTTATTATTCCGGCTCCATTCTATGTGAGTTACCCAGAAATGGCAAGACTGGCTGATGCAACACCTGTGATTATTCCAACCCacatatctaataattttcttttggatCCCAAACTGCTTGAAGCCAACCTTACTGAAAGATCAAGACTACTTATTCTTTGTTCACCGTGTAACCCAACAGGATCTGTCTACTCTAAGAAATTACTTGAAGAGATAGCAAAAATTGTAGCAAAGCACCCCAGGCTTCTGGTTCTCTGTGATGAAATTTATGAACACATAATTTATCCACCTGCAACTCATACAAGCTTTGCATCTTTACCTGGAATGTGGGACAGAACTCTAACTGTAAATGGATTTTCTAAGACATTTGCAATGACTGGTTGGCGGCTTGGGTATGTTGCTGGTCCAAAACATTTTGTTGCAGCATGTGGAAAGATTCAAAGCCAGTTCACTTCAGGGGCAAGTAGTATATCTCAGAAAGCTGGGGTTGCTGCATTAGGACTAGGCTGTGCAGGTGGAGAAGCTGTTTCTACCATGGTGAAAGCGTTCAGGGAACGAAGGGATTTCTTGGTTGAAAGCTTTAGAGAAATGGATGGTGTGAAAATATCTGAACCACAGGGGGCATTTTATCTATTCATTGATTTCAGCTCTTATTATGGAAGAGAAGCTGAAGGGTTCGGTATAATTGAGAATTCTGACTCCCTCTGTCAATACCTGCTGGACAAGGGCCTGGTTGCCCTGGTGCCAGGGAGTGCATTTGGAGATGATACTTGCATCCGCATTTCTTATGCAGAATCCCTTACTACTTTAAAGACAGCTGTAGAGAGAATTAAGAAAGCACTTGTCCCTCTAAGCTCTGCTGCGCTTGTTTAA 1428 0.43 MISMANALHNAAISTITFGDQYSISRSVFSSLSTLPLRAMQKGKHVELNRTVVVVKAKTRSDFDDTHVDISLSQRVNAVKPSKTVAISDHATALLQAGVPVIRLAAGEPDFDTPAVIAEAGMNAIREGYTRYTPNAGTLELRQAICHKLKEENGITYTPDEIVVSNGAKQSVVQAVLAVCSPGDEVIIPAPFYVSYPEMARLADATPVIIPTHISNNFLLDPKLLEANLTERSRLLILCSPCNPTGSVYSKKLLEEIAKIVAKHPRLLVLCDEIYEHIIYPPATHTSFASLPGMWDRTLTVNGFSKTFAMTGWRLGYVAGPKHFVAACGKIQSQFTSGASSISQKAGVAALGLGCAGGEAVSTMVKAFRERRDFLVESFREMDGVKISEPQGAFYLFIDFSSYYGREAEGFGIIENSDSLCQYLLDKGLVALVPGSAFGDDTCIRISYAESLTTLKTAVERIKKALVPLSSAALV 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1688 475 CDD AAT_like 102 464 - -
Ssu9g1688 475 Gene3D Aspartate Aminotransferase, domain 1 85 460 IPR015422 GO:0003824
Ssu9g1688 475 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 303 316 IPR004838 GO:0003824|GO:0009058|GO:0030170
Ssu9g1688 475 PANTHER GLUTAMATE-OXALOACETATE TRANSAMINASE5 25 470 - -
Ssu9g1688 475 SUPERFAMILY PLP-dependent transferases 72 466 IPR015424 -
Ssu9g1688 475 Pfam Aminotransferase class I and II 100 462 IPR004839 GO:0009058|GO:0030170
Ssu9g1688 475 Gene3D - 131 353 IPR015421 GO:0003824
Ssu9g1688 475 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 25 470 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1688 Ssu-Chr9 53824384 53827647 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1688 K15849 - gmx:100780254 838.95