Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1686 ATGGACTCGGACTCTGCAATCTCCGATTCCGAAACGAACCCGAACCCAGTGTCTAACCTGGACTCGGACCAGGACCTGTGCCACGACATGAGCTCCCTGGAAGACCTGGCGAACCGCGGCGCGTGGCGTTCGATCATCGACAAGGTCTCACGCGCCCGCGCCCTCTCTCTCCTCCACAAGCCCCACGACCACCTGACCTACCTCGCCTTCAACGCCCTCGCCTTCACAAAACTGCGTCGTTTCAACGAAGCCTCCGCGGAGCTCGATTCCCTCGAAGACCTCGATTCCTCCCACTACCGCTACGAAACCTACCCCAAAATGTACCCCAACCGGGTCGGATCCATGGTCCCCTTCTCCCTCCGCTGGCTCCACGCCCTAATCCCCATCAAATTAGGGCTACGTCAGCAAGGCATGGACCGCTTCTACACCCTCCTCGGTTTCGTGCGCGACAAGGTTAAGGTAAAAGAGGAAAACGACAACCTCGGCGTCTCCCTCGGTCTGTGGAAAAAACGAGAGGTTTTTGTCGTGAATTGTATAATAGGGCACCATTTGAGTCAGAAGGAGTTTGGTGTCTGTTTGAGCTTGATGAAGGAGCTTCTCTCGCGCGGTGATTCTTCGGACCCTCTGCTGGTTTCGCAGCTCGGGTACATGCAGTTGCAGATTGGGGACTTGGAGGGTGCGAAAGCGTCGTTTTTGAAGGTGGAGGGTGCGGGGAAGAGTAATGGGTCGTTGAGCGAGGTTGAGTTTAAGAACCTTGTGAATCGGAATAAGGCGTTGGTTTATTTGGTTGGGAAGGATTATGTGTCTGCGGTGAGGGAGTACGAGGAGTGCATTGAGAGGGACGGTGCGGATGTTGTGGCGGTGAACAACAAGGCTTTGTGTTTGATGTACCTTAGGGACTTGTCGGATTCTATTAAGGTGTTGGAGAGTGCGCTTGAGAGAGTTCCCACTGTGGCTCTCAATGAGACGCTTGTGGTCAATTTGTGTAGTATGTACGAGTTGGCGTATGTTAATCACTCTGATATTAAGAGGACGCTTAGTAGTTGGATTGCTCGTGTTGCCCCTGATGACTTTGATGCATCATGTACTCGTACATGA 1098 0.5328 MDSDSAISDSETNPNPVSNLDSDQDLCHDMSSLEDLANRGAWRSIIDKVSRARALSLLHKPHDHLTYLAFNALAFTKLRRFNEASAELDSLEDLDSSHYRYETYPKMYPNRVGSMVPFSLRWLHALIPIKLGLRQQGMDRFYTLLGFVRDKVKVKEENDNLGVSLGLWKKREVFVVNCIIGHHLSQKEFGVCLSLMKELLSRGDSSDPLLVSQLGYMQLQIGDLEGAKASFLKVEGAGKSNGSLSEVEFKNLVNRNKALVYLVGKDYVSAVREYEECIERDGADVVAVNNKALCLMYLRDLSDSIKVLESALERVPTVALNETLVVNLCSMYELAYVNHSDIKRTLSSWIARVAPDDFDASCTRT 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1686 365 MobiDBLite consensus disorder prediction 1 24 - -
Ssu9g1686 365 Gene3D Tetratricopeptide repeat domain 175 346 IPR011990 GO:0005515
Ssu9g1686 365 PANTHER F-BOX DOMAIN, TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN PROTEIN-RELATED 10 364 - -
Ssu9g1686 365 PANTHER D-ALANYL-D-ALANINE CARBOXYPEPTIDASE 10 364 - -
Ssu9g1686 365 SUPERFAMILY TPR-like 205 319 IPR011990 GO:0005515
Ssu9g1686 365 SMART tpr_5 285 318 IPR019734 GO:0005515
Ssu9g1686 365 SMART tpr_5 208 241 IPR019734 GO:0005515
Ssu9g1686 365 SMART tpr_5 251 284 IPR019734 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1686 K20309 - gmx:100779691 637.876