Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1683 ATGGGTTTGGGGCCTGGGGAGAGTTCAGTTCCAAGTTTTCTTGCCAAATCAGGATTAATCAACGATTCTTTTTCCTTGTGCTATAATGAAGATGATTCTGGTAGAATGTTTTTTGGGGACCAGGGACCAACCGTCCAACAGTCTACTTCATTTTTGCCTTTGGATGGATTataTTCAACCTATATTATTGGAGTGGAGTCATGTTGTATTGGGAATTCTTGTCTTAAAATGACAAGTTTTAAAGCACAGGTTGATAGCGGGACGTCATTTACATTTCTTCCTGGCCATGTATATGGAGCAATAGCTGAGGagTTTGATCAACAAGTAAATGGTTCAAGATCTAGCTTTGAAGGATCTCCATGGGAGTATTGTTATGTACCCAGTTTGCAAGAGTTGCCAAAGGTTCCCAGCTTAACTCTCATGTTCCAACAGAATAACAGTTTTGTGGTCTATGATCCTGTGTTTGTATTCTATGGCAATCAGGGAGTCATTGGATTTTGTTTAGCCATACAGCCAACTGAAGGGGATATGGGAACAATTGGACAGAACTTCATGACAGGATACCGTTTGGTATTTGATAGGGAAAACAAGAAGCTAGCGTGGTCACGCTCAAATTGTCAGGATCTCAGTCTGGGTAAGAGGATGCCCCTTTCACCAAATGAGACTTCATCAAACCCATTACCTACAGATGAGCAGCAAAGAACCAACGGGCGTGCAGTTGCTCCAGCTGTTGCTGGAAGAGCTCCCCGAAAACCTTCGGCTGCTTCGTCTCGGATGATTTCGTCATGCTGGGAACATTGGCACTGCtatttgtttcttctatttcaACTTGTGTCTGCCTTTTACTGA 849 0.4217 MGLGPGESSVPSFLAKSGLINDSFSLCYNEDDSGRMFFGDQGPTVQQSTSFLPLDGLYSTYIIGVESCCIGNSCLKMTSFKAQVDSGTSFTFLPGHVYGAIAEEFDQQVNGSRSSFEGSPWEYCYVPSLQELPKVPSLTLMFQQNNSFVVYDPVFVFYGNQGVIGFCLAIQPTEGDMGTIGQNFMTGYRLVFDRENKKLAWSRSNCQDLSLGKRMPLSPNETSSNPLPTDEQQRTNGRAVAPAVAGRAPRKPSAASSRMISSCWEHWHCYLFLLFQLVSAFY 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1683 282 Gene3D Acid Proteases 1 40 IPR021109 -
Ssu9g1683 282 Pfam Xylanase inhibitor C-terminal 80 202 IPR032799 -
Ssu9g1683 282 PANTHER ASPARTYL PROTEASES 1 224 IPR001461 GO:0004190|GO:0006508
Ssu9g1683 282 Gene3D Acid Proteases 41 211 IPR021109 -
Ssu9g1683 282 SUPERFAMILY Acid proteases 1 207 IPR021109 -
Ssu9g1683 282 ProSiteProfiles Peptidase family A1 domain profile. 1 202 IPR033121 -
Ssu9g1683 282 MobiDBLite consensus disorder prediction 211 250 - -
Ssu9g1683 282 PANTHER ASPARTIC PROTEINASE-LIKE PROTEIN 1 1 224 - -
Ssu9g1683 282 MobiDBLite consensus disorder prediction 211 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1683 Ssu-Chr9 53805447 53807730 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1683 1 209 Miscellaneous Gene Families AT1G77480 21.681 8.05e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1683 - - gmx:100782209 542.732