Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1679 ATGGACCAAATAAAGACCCATTGCTATGTTACTTACTCGTctgttgaagaagccattgagacACGAAATGCTGTGTATAATTTGCAATGGCCGCCTAATGGTGGGCGCCTCCTAGTTGCTGAGTATGTTGATCCTGAAGAAGTGAAAATGAAGTTAGAACCTCCTCCTACTCAGGCTGCCTCTGTCAGCCCTGCTCCAACAGTTCCTCCTGCCCCCCCTTCATCACAACCAGAGCCTTCCCCCCGTCTGCACAGGGAGCAGCATCCAGTTCCAGCTACTCTcccacctccaccaccattgtcaaAACCCCCACCAGTAGCAAGAGATCGGCTTCCATCTCCACCACCCCTTCCCGAGAAAGTTGACCCACCTATTGTCACTCTGGATGATCTCTTCCGCAAAACCACAGCAACTCCTCGGATCTACTATTTACCTTTGTCTGAAGAGCAAGTTGCCGCAAAACTTGCAGCTCAGGGTAAAAGCATGAGGCATTAG 495 0.4586 MDQIKTHCYVTYSSVEEAIETRNAVYNLQWPPNGGRLLVAEYVDPEEVKMKLEPPPTQAASVSPAPTVPPAPPSSQPEPSPRLHREQHPVPATLPPPPPLSKPPPVARDRLPSPPPLPEKVDPPIVTLDDLFRKTTATPRIYYLPLSEEQVAAKLAAQGKSMRH 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1679 164 MobiDBLite consensus disorder prediction 49 126 - -
Ssu9g1679 164 MobiDBLite consensus disorder prediction 59 79 - -
Ssu9g1679 164 MobiDBLite consensus disorder prediction 90 122 - -
Ssu9g1679 164 CDD RRM_ACINU 1 53 IPR034257 -
Ssu9g1679 164 PRINTS Pistil-specific extensin-like signature 86 104 IPR003882 -
Ssu9g1679 164 PRINTS Pistil-specific extensin-like signature 51 74 IPR003882 -
Ssu9g1679 164 PANTHER SAP DNA-BINDING DOMAIN-CONTAINING PROTEIN 1 161 - -
Ssu9g1679 164 Pfam RNSP1-SAP18 binding (RSB) motif 120 162 IPR032552 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1679 Ssu-Chr9 53762215 53762820 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1679 K12875 - gmx:100816245 271.552