Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1662 atgTCTCTAATGGAAGCCAAAGCAGATTATACCCAAGATGGCACCGTCGATTTCCATGACCAGCCTGCAGTTACATCTAAAACTGGCAAGTGGAAGGCTTGCGCTTTTCTTGTTGgCTATGAAGCATTTGAAAGGATGGCCTTCTATGGAGTCGCTTCCAACTTAGTCAATTACCTTACAACCCAACTTCATGAAGATACTGTTTCATCAGTGAGGAATGTGAATAACTGGTCAGGATCTGTGTGGATAACGCCAATTCTTGGGGCTTACATAGCAGATTCTTACTTGGGTCGCTTCTGGACTTTCACTGTCTCATCTCTCATTTATGTCTTGGGGATGACTCTTCTCACTGTAGCTGTGTCACTCAAGAGCTTGAGGCCAACATGCACCAATGGCATATGCAACAAGGCTTCAACCTCACAAATCGCATTTTTTTACACTGCCCTTTACACTATGGCAACTGGGGCCGGGGGAACAAAACCCAACATCTCAACCTTTGGTGCTGACCAGTTTGATGACTTCAATCCCAATGAGAAAGAGCTAAAGGCCTCCTTCTTCAACTGGTGGATGTTTACCTCATTCTTAGGTGCTTTGATTGCCACTTTAGGATTGGTATACATTCAAGAGAACTTGGGATGGGGACTTGGGTATGGGATCCCCACGGCTGGTCTTCTATTGTCTTTGGTCATTTTCTATATAGGCACACCAATATATCGCCACAAGGTAAGGAAGACCAAAACTCCTGCCAGGGACCTAATTCGTGCACCCATTGCAGCCTTCAGGAATAGGAAACTCCAACTCCCTAGTAACCCCTCGGATCTCTATGAGCATGATCTACAACATTACGTTAATAGTGGGAAACGGCAAGTCTATCACACTCCAACTTTGAGGTTTTTGGACAAGGCTGCTATCAAAGAAGACAGTGCTGGTTCCACAAGAGTACCATTGACAGTAACCCAAGTGGAAGGAGCTAAGCTTATCTTTGGCATGGTCCTTGTATGGCTAGTGACACTGATTCCCAGCACCATTTGGGCACAAATCAACACTCTTTTTGTGAAACAAGGCACCACTTTGGACAGAAACCTTGGTCCTCATTTTAAAATTCCATCAGCCTCTCTTGGAAGCTTTGTGACACTCTCCATGCTTCTCTCAGTGCCAATGTATGACTGGTTTTTCGTGCCGTTCATGCGCCAGAAAACTGGCCACCCTAGAGGAATCACGTTGCTTCAAAGGCTTGGAATTGGATTCTCAATCCAGATCATAGCCATTGCAATTGCTTATGCAGTGGAAGTTAGAAGAATGCATGTCATAAGAGCAAACCATGTAGCTGGTCCTAAAGATATTGTCCCTATGAGTATATTTTGGCTCATGCCTCAGTATGTTCTAATAGGGATAGCAGATGTGTTCAATGCCATTGGATTGCTAGAATTCTTCTATGATCAATCCCCTGAAGACATGCAAAGTCTTGGAACTACATTCTTCACCAGTGGGATCGGTGTTGGGAACTTCTTGAACAGCTTTTTGGTGACAATGGTTGACAAAATAACAGGAAGGGGTGACAAAAAGAGCTGGATAGGGAACAACTTGAATGATTGTCATTTGGACTACTATTATGGGTTTTTGTTGGTCATGTCTAGTGTCAATTTGGTGGTTTTTCTTTGGGTTTCGAGTAGATATATTTATAAGAGGGAATCAGTAAGGGTCAAAGAGGGCCTTTGTGTTCAAATGGAGGGAAACCCAACTTTGGATGCCTCTCTTGGTTTACAAGTGTGA 1773 0.4371 MSLMEAKADYTQDGTVDFHDQPAVTSKTGKWKACAFLVGYEAFERMAFYGVASNLVNYLTTQLHEDTVSSVRNVNNWSGSVWITPILGAYIADSYLGRFWTFTVSSLIYVLGMTLLTVAVSLKSLRPTCTNGICNKASTSQIAFFYTALYTMATGAGGTKPNISTFGADQFDDFNPNEKELKASFFNWWMFTSFLGALIATLGLVYIQENLGWGLGYGIPTAGLLLSLVIFYIGTPIYRHKVRKTKTPARDLIRAPIAAFRNRKLQLPSNPSDLYEHDLQHYVNSGKRQVYHTPTLRFLDKAAIKEDSAGSTRVPLTVTQVEGAKLIFGMVLVWLVTLIPSTIWAQINTLFVKQGTTLDRNLGPHFKIPSASLGSFVTLSMLLSVPMYDWFFVPFMRQKTGHPRGITLLQRLGIGFSIQIIAIAIAYAVEVRRMHVIRANHVAGPKDIVPMSIFWLMPQYVLIGIADVFNAIGLLEFFYDQSPEDMQSLGTTFFTSGIGVGNFLNSFLVTMVDKITGRGDKKSWIGNNLNDCHLDYYYGFLLVMSSVNLVVFLWVSSRYIYKRESVRVKEGLCVQMEGNPTLDASLGLQV 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1662 590 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 15 569 IPR000109 GO:0016020|GO:0022857|GO:0055085
Ssu9g1662 590 PANTHER PROTEIN NRT1/ PTR FAMILY 5.1 15 569 - -
Ssu9g1662 590 SUPERFAMILY MFS general substrate transporter 21 556 IPR036259 -
Ssu9g1662 590 Pfam POT family 99 525 IPR000109 GO:0016020|GO:0022857|GO:0055085
Ssu9g1662 590 CDD MFS_NPF5 31 561 IPR044739 GO:0042937|GO:0042938|GO:0071916
Ssu9g1662 590 Gene3D MFS general substrate transporter like domains 2 568 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1662 Ssu-Chr9 53513870 53518906 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1662 4 585 Organic Solute Cotransporters AT2G40460 72.991 0.0 875
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1662 - - gmx:100815188 1127.08