Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1650 ATGAGAAAATATCTTGAATCTGCCGCAAGGCTGGAAGAGCTATCGCGGATTGTGTCATCCGCGAAACCCCAAAGGCCAAAGGGAGCGCTACCCAGATCGCCGAACCGTGTGGCGGCCACCCCTCGAAGTGCGAACCCAAGTGGTGTTAAGGTGGAACCTGCGAAGAAGATGGAAGCTTTGGAAGAATGTCGGACACCCCTCGCCAAGGTTGTCGCTGATTGCGCCAAGCGGTGGTTCCAGGACACCCTCAAGGAGGCTAAGGCTGGGGACTCTGCCATGCAGCTTTTGGTTGGCCAAATGTATTACTCTGGCTATGGTGTTCCAAGGGATCCTCAAAAGGGACATGTTTGGATTAGTAAAGCGTCAAGAAGTCGAAATTCAGTTTGGAAAGTGTGCGGTAAACGGCCAGGTTACAGAGCAAGTGATTCAGATTCATGTGAACAGGAGAACAAAGATAAATCTTCTCCTTAA 471 0.5074 MRKYLESAARLEELSRIVSSAKPQRPKGALPRSPNRVAATPRSANPSGVKVEPAKKMEALEECRTPLAKVVADCAKRWFQDTLKEAKAGDSAMQLLVGQMYYSGYGVPRDPQKGHVWISKASRSRNSVWKVCGKRPGYRASDSDSCEQENKDKSSP 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1650 156 MobiDBLite consensus disorder prediction 134 156 - -
Ssu9g1650 156 MobiDBLite consensus disorder prediction 17 52 - -
Ssu9g1650 156 SUPERFAMILY HCP-like 79 123 - -
Ssu9g1650 156 MobiDBLite consensus disorder prediction 140 156 - -
Ssu9g1650 156 PANTHER TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN-CONTAINING PROTEIN-RELATED 1 153 - -
Ssu9g1650 156 SMART sel1 91 126 IPR006597 -
Ssu9g1650 156 PANTHER EXPRESSED PROTEIN 1 153 - -
Ssu9g1650 156 Gene3D Tetratricopeptide repeat domain 43 132 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1650 Ssu-Chr9 53310552 53311778 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1650 - - gmx:100779520 265.388