Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1647 ATGTCAACCTCATCCTCTTCCCAAAGCCAAAGCCTGAAAATTGGCATAGTTGGATTCGGCACCTTTGGCCAGTTTCTGGCCAAGACAATGATAAAACAGGGCCACACTCTCGCAGCAACTTCTCGATCCGATTACTCTGACCTCTGTCTCCAAATGGGCATCCATTTTTTCAGGGATGTCAACGCATTCCTCGCCACGGACATAGATATCATAGTGCTATGCACATCGATATTATCACTGTCCGAGGTTGTCAGCTCGATGCCACTCACTTCCCTGAAGCGCCCAACACTCTTTGTTGATGTCCTTTCGGTCAAAGAGCACCCAAGAAACCTTCTACTACGAGTGTTGCCAGAGGATGCAGACATACTCTGCACGCACCCGATGTTTGGACCTGTGACTGGGAAGAATGGATGGAGAGATCTGACTTTCATGTATGACAGAGTTCGAATACGAGATGAAGCCACCTGCTCTAATTTCCTCCAAATTTTTGCAAGTGAGGGTTGCAAGATGGTACAGATGTCCTGTGAGGAACATGACAAAGCAGCTGCGAAGAGCCAATTTATCACACACACAATAGGCAGGACATTGGCAGAAATGGACATTAAATCCACACCTATTGACACCAAGGGCTTCGAGGCACTTGTTAAATTGAAGGAGACGATGGTGGGAAATAGTTTAGATTTGTACAGTGGATTATTCGTGTATAACAGATTCGCCAGACAAGAGCTGGAAAACCTTGAACATGCCTTGTACAAAGTCAAAGAAATGCTGGTTCAAAGGATGAATGAGGAGCAGGgtcaagaaagaaatgaaagttgA 819 0.4469 MSTSSSSQSQSLKIGIVGFGTFGQFLAKTMIKQGHTLAATSRSDYSDLCLQMGIHFFRDVNAFLATDIDIIVLCTSILSLSEVVSSMPLTSLKRPTLFVDVLSVKEHPRNLLLRVLPEDADILCTHPMFGPVTGKNGWRDLTFMYDRVRIRDEATCSNFLQIFASEGCKMVQMSCEEHDKAAAKSQFITHTIGRTLAEMDIKSTPIDTKGFEALVKLKETMVGNSLDLYSGLFVYNRFARQELENLEHALYKVKEMLVQRMNEEQGQERNES 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1647 272 Coils Coil 236 256 - -
Ssu9g1647 272 Gene3D - 1 179 - -
Ssu9g1647 272 Pfam Prephenate dehydrogenase, nucleotide-binding domain 36 134 IPR046826 -
Ssu9g1647 272 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 10 173 IPR036291 -
Ssu9g1647 272 ProSiteProfiles Prephenate/arogenate dehydrogenase domain profile. 12 272 IPR003099 GO:0004665|GO:0006571|GO:0008977
Ssu9g1647 272 PANTHER AROGENATE DEHYDROGENASE 1, CHLOROPLASTIC-LIKE 2 269 - -
Ssu9g1647 272 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 174 259 IPR008927 -
Ssu9g1647 272 PANTHER AROGENATE DEHYDROGENASE-RELATED 2 269 IPR045011 GO:0006571|GO:0033730
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1647 Ssu-Chr9 53297904 53299726 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1647 K15227 - gmx:100810896 463.766