Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1641 ATGTCCCATATGCGATCCTCCCTTGAGAAGCAAGTTGTAGTTCCCATCCATAATGTCAGATGGAACTCTAAAAGTGGACCTTTCATCCGGCATTTGGCATATGGTCAGAAGCACATTAATTCCCACACGAAGGGGAAGAACACACTAGTTTCATTTGCAAAAACAGCTGAAGCTATCAACACATCCAAGTCTGATGCTTCTTCAAATAGCACTCCACAAGACTCATTGGAgaaaaagcctttgcaaaatGCTACTTTTCCTAATGGATTTGAGGCTTTGGTATTAGAGGTCTGTGATGAGACTGAAATTGCTGAACTGAAAGTAAAGGTTGGAGATTTTGAAATGCATATTAAGCGAAACATTGGAGCAACAAAGGCTCCTTTGTCTAACATTTCACCAACTACACCACCACCTATTCCAAGTAAACCTATGGATGAATTGGCACCCGCAACCCTGCCACCAACACCACCAAAATCATCTCCAGAAAAAACCAACCCATTTGTAAATGCTTCCAAAGTGAAATCACCAAAATTGGCAGCATTGGAGGCTTCTGGTACCAATACCTATGTCTTAGTATTGTCTCCCACGGTTGGCTTATTCCGAAGAGGTAGAACAGTGAAAGGGAAGAAGCAACCTCCTATCTGTAAAGAGGGCGATTTAATCAAAGAAGGGCAAGTAATAGGGTATTTGGATCAGTTTGGCACTGGACTTCCTATCAAGTCTGATGTGGCTGGAGAAGTGTTGAAGCTACTTGTTGAGGATGGAGAGCCTGTTGGTTATGGAGACCCTCTTATTGCTGTCTTGCCATCTTTTCATGACATCAAGTGA 828 0.4179 MSHMRSSLEKQVVVPIHNVRWNSKSGPFIRHLAYGQKHINSHTKGKNTLVSFAKTAEAINTSKSDASSNSTPQDSLEKKPLQNATFPNGFEALVLEVCDETEIAELKVKVGDFEMHIKRNIGATKAPLSNISPTTPPPIPSKPMDELAPATLPPTPPKSSPEKTNPFVNASKVKSPKLAALEASGTNTYVLVLSPTVGLFRRGRTVKGKKQPPICKEGDLIKEGQVIGYLDQFGTGLPIKSDVAGEVLKLLVEDGEPVGYGDPLIAVLPSFHDIK 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1641 275 MobiDBLite consensus disorder prediction 131 161 - -
Ssu9g1641 275 PANTHER IS A MEMBER OF THE PF|00364 BIOTIN-REQUIRING ENZYMES FAMILY-RELATED 1 275 - -
Ssu9g1641 275 CDD biotinyl_domain 192 267 - -
Ssu9g1641 275 MobiDBLite consensus disorder prediction 126 168 - -
Ssu9g1641 275 MobiDBLite consensus disorder prediction 61 82 - -
Ssu9g1641 275 PANTHER BIOTIN/LIPOYL ATTACHMENT DOMAIN PROTEIN 1 275 - -
Ssu9g1641 275 Pfam Biotin-requiring enzyme 208 266 IPR000089 -
Ssu9g1641 275 SUPERFAMILY Single hybrid motif 183 266 IPR011053 -
Ssu9g1641 275 Gene3D - 188 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1641 Ssu-Chr9 53189056 53194536 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1641 94 269 Acyl Lipid Metabolism Gene Families AT5G15530 25.424 1.00e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1641 - - gmx:100792471 461.455