Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1630 ATGATTCCTCGGCTTCTGGGAGCCTATATAAATCGCCAATTCTTAATCAACGTCCGACACATCCTACGTTTCTTTGTTGCAGCAATTCAGACACTGTACCTATTCGTGACCATGTCCAACCCCAGCCAATCCGAGTCAGCGTCTGAACCCTCTGCTTCGGAAACGCCACCGACGCAACCCTCCGTGCCCATTTCTTATCCAATCAAAACCCTTCAGGAGTTGGAGTCTCGCTCGTATTTCGAGTCCTTTCACTACTCTTTCAACAAAGCTTCGGTTCCAATTCCCAACGCGAATTCTTCTTCGTTGCCCAATAGGCGCAGGTTGCTTGTGTGCCATGACATGGCTGGGGGCTACTTGGACGACAGGTGGATTCAAGGTGGCACCAACCCCGATGCTTATGCCATTTGGCATTGGCATTTGATCGATGTCTTTGTCTATTTCTCACACACTCTCGTCACTCTTCCTCCTCCTTCATGGACTAACACCGCCCATCGCCATGGTGTTAAGGTGTTGGGGACTTTCATCGCTGAATGGGATGAGGGAAGGGCTGCCTGTGACACACTGCTTTCAACAAAGGAAACTGCACATATGTATGCAGAACGTCTGGCTGAGCTTGCTGCTGATTTAGGCTTTGATGGGTGGCTAATAAACATGGAAGTAAATTTGGATCAGggtcaaatttctaatttgaaagaGTTTGTAGACCATTTGTCATTAACAATGCATTCTTCTGTGCCTGGATCATTAGTGCTATGGTATGACAGTGTTACAGTTGATGGTAAATTGAATTGGCAAGATCAACTAAATGAACATAATAAGCTGTTCTTTGATATATGTGATGGAATATTTGTGAATTATACATGGAAGAAAGACGATCCAAGGCTCTCTGCTGCTGTTGCCAGCGATCGGAAGTTCGATGTGTACATGGGAATTGATGTATTTGGAAGGAACACATATGGTGGTGGACAATGGAATGTGAATGTTGCTCTTGATGTACTAAGAAAGGATGATGTCTCTGCCGCAATATTTGCTCCTGGATGGGTCTATGAGACAAAGCAAGCCCCAGATTTTGAGACTGCTCAGAATAGTTGGTGGGGTCTTGTGGAAAAGTCATGGGGAGTAATGCGAAATTTCCCTGGAGTATTACCATTCTACACTAATTTTGATCAGGGACGTGGTTATCATATTTCAGTTGATGGTGACAATGTATCAGATGCTACTTGGTGCAACATTTCATGCCAAGGCTTTCAGCCACTCCTTGAGTTTGCTGATCCTACAAATTCTATTCAAGTTTCTGTAGACTTGAAGGAAGCATCATATAGTGGAGGGGGAAACATTACATTCAAAGGATCTCTTGAAGAGCAAACTTACTTTGAGAGCAAAATCTTTCAAGGAGAGTTTCTTTTGAGCGAGTTGCCTATCCACTTGATTTATTCTGCAAGCTATAACTTCTTTATCATTATTGCTGAAAAAACTGCACATTAA 1485 0.431 MIPRLLGAYINRQFLINVRHILRFFVAAIQTLYLFVTMSNPSQSESASEPSASETPPTQPSVPISYPIKTLQELESRSYFESFHYSFNKASVPIPNANSSSLPNRRRLLVCHDMAGGYLDDRWIQGGTNPDAYAIWHWHLIDVFVYFSHTLVTLPPPSWTNTAHRHGVKVLGTFIAEWDEGRAACDTLLSTKETAHMYAERLAELAADLGFDGWLINMEVNLDQGQISNLKEFVDHLSLTMHSSVPGSLVLWYDSVTVDGKLNWQDQLNEHNKLFFDICDGIFVNYTWKKDDPRLSAAVASDRKFDVYMGIDVFGRNTYGGGQWNVNVALDVLRKDDVSAAIFAPGWVYETKQAPDFETAQNSWWGLVEKSWGVMRNFPGVLPFYTNFDQGRGYHISVDGDNVSDATWCNISCQGFQPLLEFADPTNSIQVSVDLKEASYSGGGNITFKGSLEEQTYFESKIFQGEFLLSELPIHLIYSASYNFFIIIAEKTAH 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1630 494 CDD GH85_ENGase 109 427 - -
Ssu9g1630 494 Pfam Glycosyl hydrolase family 85 118 395 IPR005201 GO:0005737|GO:0033925
Ssu9g1630 494 Gene3D Glycosidases 58 380 - -
Ssu9g1630 494 PANTHER BETA N-ACETYLGLUCOSAMINIDASE, PUTATIVE-RELATED 4 480 - -
Ssu9g1630 494 PANTHER ENDO BETA N-ACETYLGLUCOSAMINIDASE 4 480 IPR032979 GO:0033925
Ssu9g1630 494 MobiDBLite consensus disorder prediction 44 64 - -
Ssu9g1630 494 Gene3D - 381 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1630 Ssu-Chr9 52980434 52986655 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1630 4 480 Glycoside Hydrolase AT3G11040 57.058 0.0 607
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1630 K01227 - gmx:100804658 869.766