Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1619 ATGGCGAACGTGGATGAACTTATATCTTCCTTAATCTCAAACATCCATGCCTACAATGGCAAAGACCCTCTTCTTCCCTGGCTTCGCGCGATCCGAAAGATAAAGGACACTCTTCCTCCCCAAACCCTAAAGGAAAAACTACCCGGGTTCCTCCAGAAATGCGCCCACACCTTCGAGCTCGATCGACATTACAGAAACGATATGCGCTATCTTCGGGTTTGGCTCCACCTGATGGATTTTGTGGATGATCCAAAAGTGCTTTTGAGAACCATGGAGGTTAATTGCATTGGGACAAAGCGTTGTCAGTTCTACCAGGCATATGCTCTTTACTACGAGAAGAACAAGAAGTACGATGAGGCAGAGAAAATGTACCATCTGGGAGTGAACAACCTTGCAGAGCCTCTGGATGAATTGCAGAAATCATATGAACAATTTCTTCAACGCAAGGAGCGAAGAAACAATAAGAGAATCCAGCACCAGGAAGCGAGAGCTGCCAGGAGGCCTCTGTCTTCAAAGAGCTTGCCTTCTCATGACAATAAGGCTGAGGGAAGCAATGGATCAAGCTGTGTTGAGGGTGTGCAAAACGGACCCCGAATTGAGAATTATGCAGCTAAAGGTGTTGCTGATGATAAACACGTAAAGACTAACAAGGATGAGTGCAAGAGATTTCGTGGTGATGATACAGTTGTAGTCAAGTTTGTTGACACTGCCATGGTTGGAAAGTCTGAAGCAGAAGATGCATGCCATCATGGATTAGTGGATCCTACAATAAATATGAAGGAGGCCATGAATGCCATTAACAGCATGTTCCGGGAGCCATTAGAGACTGTTCCAATAGTGAGGAAATCACATAAAAACCATTCAAAAGAAGATCACAGTTCGAAGAACGAGTTTGAGGTTTTTGTTGATGAAAACTTGGATAATGGAATCAAACCATCCGGTTCCTTATCACTTCAGAACAGGACTGAAGCTAGCCAACCTCACCAAGAACCGCTCCAGATATACATTGATGATGAAGAACATTCCGAGACAGGTGATGTGAATGTGAACTTGTCTGAAGGTTGTACTTCATCGGCTTCACAAACAAATGGCTTTGTTTTTCTCCGCCCCAAGGATATTCCTTCTGAAAAATCTAGTGATATGGATGCTGAAAGCTCTCGTAATTCAAAGTTCAGAGAGGATACAGTTGTTTGCAGATTTGTTGGTTCCGCCATTTTGAATGAACCAGAGGTGGAAAATGTTTGTCACCACGGTTTAGTAGACCCCACCATCAACATGAAGGAAGCTATGGCTGACATAAATAACATGTTTGGGAAGCCAATAGATTTTGTTAGGAGAAGAAGATCCACGAAGCAGGAGAAAGTACCCGAGAGCAATAGCGGAAAGGAGTTTGGTGGGTTTTCAATCCTTGCTGATGATGACCACCTGGAACAACAAggtccaccaccaccaccaccaaaagTGCCAGGAAAGTCAAGGGAATCTGATTTGTTTGAGCCAACTCTCCTCACAAAGGAAGCCATGGACGATATAAACAAAATGTTTAATATGCCtctgaatttttag 1566 0.4259 MANVDELISSLISNIHAYNGKDPLLPWLRAIRKIKDTLPPQTLKEKLPGFLQKCAHTFELDRHYRNDMRYLRVWLHLMDFVDDPKVLLRTMEVNCIGTKRCQFYQAYALYYEKNKKYDEAEKMYHLGVNNLAEPLDELQKSYEQFLQRKERRNNKRIQHQEARAARRPLSSKSLPSHDNKAEGSNGSSCVEGVQNGPRIENYAAKGVADDKHVKTNKDECKRFRGDDTVVVKFVDTAMVGKSEAEDACHHGLVDPTINMKEAMNAINSMFREPLETVPIVRKSHKNHSKEDHSSKNEFEVFVDENLDNGIKPSGSLSLQNRTEASQPHQEPLQIYIDDEEHSETGDVNVNLSEGCTSSASQTNGFVFLRPKDIPSEKSSDMDAESSRNSKFREDTVVCRFVGSAILNEPEVENVCHHGLVDPTINMKEAMADINNMFGKPIDFVRRRRSTKQEKVPESNSGKEFGGFSILADDDHLEQQGPPPPPPKVPGKSRESDLFEPTLLTKEAMDDINKMFNMPLNF 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1619 521 MobiDBLite consensus disorder prediction 150 194 - -
Ssu9g1619 521 ProSiteProfiles BUB1 N-terminal domain profile. 11 167 IPR013212 -
Ssu9g1619 521 MobiDBLite consensus disorder prediction 373 389 - -
Ssu9g1619 521 PANTHER OS11G0128700 PROTEIN 4 521 - -
Ssu9g1619 521 Gene3D - 9 166 - -
Ssu9g1619 521 Coils Coil 135 155 - -
Ssu9g1619 521 Pfam Mad3/BUB1 homology region 1 12 128 IPR013212 -
Ssu9g1619 521 MobiDBLite consensus disorder prediction 172 194 - -
Ssu9g1619 521 PANTHER MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 4 521 IPR015661 GO:0007094
Ssu9g1619 521 SMART mad3_bub1_i 4 128 IPR013212 -
Ssu9g1619 521 MobiDBLite consensus disorder prediction 150 166 - -
Ssu9g1619 521 MobiDBLite consensus disorder prediction 366 389 - -
Ssu9g1619 521 MobiDBLite consensus disorder prediction 447 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1619 Ssu-Chr9 52837336 52839614 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1619 - - gmx:100806627 902.123