Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1605 ATGTTCAATAACCAACCAGATTGGCCCGAGCCCATTGTCCGGGTTCAGTCCTTATCCGAAAGCTGCATAGATTCAATCCCTGAAAAGTATATCAAGACTTCTACTGATAGGCCATCCATAAACTCTACTTTTGATGATGCCAACATCCCAATCATCGACCTTGGAGGTCTATTTGGCGCTGACCAAGATGTCTCAGCCTCAATCCTTAGGCAAATCTCAGACGCTTGCAAAGAGTGGGGCTTCTTCCAAATCACAAACCATGGTGTCAGCCCCGATTTGATGGACAAGGCTAGGGAAACTTGGCGTCAATTCTTTCACTTGCCCATGGAGGCAAAGCAGCAATATGCAAACTCACCAAAAACTTATGAAGGATACGGAAGCAGACTTGGAATTGAGAAAGGTGCTATTCTTGATTGGAGTGACTACTACTATCTTCACTATCTTCCGTTGTTCCTCAAGGACTATAACAAATGGCCTGCTTTGCCTCCCTCTTGCAGGGAAGTGTTTGATGAGTATGGGAGAGAGTTAGTGAAGCTATGTGGGAGGTTGATGAAGGTTTTGTCAATAAACCTTGGATTAGAtgaaaaaattcttcaaaatggTTTTGGAGGGGAAGATATAGGGGCGTGTCTAAGGGTGAATTTTTACCCCAAGTGTCCACGGCCAGAGCTGGCGCTGGGTTTGTCATCACACTCGGACCCTGGAGGAATGACTATGTTGCTTCCGGATGATCAAGTTCCTGGTCTTCAAGTTCGCAAATGCGATAATTGGATCACCGTGAAGCCTGCTCGCCATGCTTTCATCGTCAATATCGGTGACCAAATTCAGGTGAGTAATCTCCCTCGAACAATTATCCCTACCTGGTAA 867 0.4487 MFNNQPDWPEPIVRVQSLSESCIDSIPEKYIKTSTDRPSINSTFDDANIPIIDLGGLFGADQDVSASILRQISDACKEWGFFQITNHGVSPDLMDKARETWRQFFHLPMEAKQQYANSPKTYEGYGSRLGIEKGAILDWSDYYYLHYLPLFLKDYNKWPALPPSCREVFDEYGRELVKLCGRLMKVLSINLGLDEKILQNGFGGEDIGACLRVNFYPKCPRPELALGLSSHSDPGGMTMLLPDDQVPGLQVRKCDNWITVKPARHAFIVNIGDQIQVSNLPRTIIPTW 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1605 288 SUPERFAMILY Clavaminate synthase-like 12 277 - -
Ssu9g1605 288 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 206 288 IPR005123 -
Ssu9g1605 288 PANTHER LEUCOANTHOCYANIDIN DIOXYGENASE-LIKE PROTEIN 9 277 - -
Ssu9g1605 288 Pfam 2OG-Fe(II) oxygenase superfamily 209 278 IPR044861 -
Ssu9g1605 288 Pfam non-haem dioxygenase in morphine synthesis N-terminal 49 160 IPR026992 -
Ssu9g1605 288 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 9 277 - -
Ssu9g1605 288 Gene3D - 10 280 IPR027443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1605 Ssu-Chr9 52635531 52636596 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1605 15 277 Glycosyltransferase AT5G59530 30.147 4.46e-32 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1605 - - gmx:100814471 538.88