Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1600 atgaaaacatcACGTTACTCCTCCGGAAACCTCTGTCTCGCCGTCGCCGCCGTGTTTATACTCTCTCTGGCGCCCTCATCCCATGGTCTCGGCTCCGGCGCCACCCTGGCCATCTCGGACGCCTCCGCCACCGTGTGCGGCGTCGTAGCAGGCGAATCCACGCGCCGCATTGAGTGTTACCGTCAGGGTCAGGTCGTTCCCATCGTTCCCGACGTTAGCTTTTCGTCAATTTCCGGTGGGAGGGACTACTTCTGCGGCCTAAGGTCGAGTAACTCTAATTTGTTTTGCTGGAGCACAACAACCTCTTCCTTCGACAGAAAAAGGCTTTACAACGATAGTTCTGTTCCATTGGAGAATCTCGCCGTCGGAGATACCCACGTTTGCGCCACCGTGGTCGGTGGTGGCACGGTGCGGTGCTGGAGAACCGGTGACACGTTTCAACGGCCATCTGGGTCTGATCAATTCGCTTCGATTTCATCTGGGTATGGCTTCTCTTGCGgaattttgaaaaatggttTTCGGGTTCGGTGCTGGGGAGACACGGATGTTTCCAACGTTGTTGGACAGATTGAGAATGCTTTTGGAAACATGTCCATGTTGAGTCTTGTCGCAGGTGGTTCGTATGTTTGTGGGTTGAACTCAACTGGGTTTTTGGTGTGTGGAGGAAGTAGCAGTTCAGGGCAACTGGATTATCCTCCGGGTGGGGCTTTTGAGTATGGTGGGTTGGCACTTGGAGCTAAGCATGGTTGTGCGATTAGAGGGTTGAATGGTTCGGTTGTGTGTTGGGGTGGCAATGGGGAATTCTCGGTGAATGTTACGGAAGGAGTTTCCTTTGAGGTAATTGTTTCTGGGTCCAATTTTGTCTGTGGATTGACAACAAACAATTTGACAGTGGTGTGTTGGGGTCCTGGTTGGTCTAATAGTTCGAGTTTTGAGCTTCCTTTGCCGAGGGTTCTTCCAGGGCCTTGTGTTCAATCTTCTTGTGGAGAGTGTGGTTCATATCTTGATTCTCAATCTCTTTGCTCTGGCTCTAATAACATTTGTAAGCCAATGACTTGTAGGCCTCAACCAACAGTTCCACCGCCGCCATCACcatcaccgtcaccaccaccatctccGTCAGAatcaccaccgccaccaccgcCGCTACCACTGTCGCCGCCATCGTCTTCTCGATCAAAGACCTTGACAAGAGGCTTATTGGCATTTGCTATTATTGGTTCCGTGGGGGGTTTTGCTGGAATATGCACAATAGTTTATTGCTTATGGACTGGAGTTTGTTTTGGGAAGAAGAAAGTTCACAATTCTGTGCAGCCCACAATCACTAGAGGTAGCAGTGGTTCCAATGGTGGGGGTGCTTCTAATAATAGCGGTTCTTCCTTTGGCGTCGTTTCGCTAGAGTTGCTCTCTGGCCACAAAGCTATCCATAAAAACGAGAATGGGTTGCCCAGAAATGTGGTCGATTTTGTGGTACCATTCATTGCTCAAGATGAGATTCACACGGCGTCGGACCAAAGAGTGCCCCCACCCACACCATTTGAGCTGGTGGACGTGGAGTTTGTGGGTTATTTGGCAGCAGATTGTGTTGGGCTAGAGGGTCGAGATAGACCAACTATGTCTCAAGCTGTAAATAACTTGGAAAGAGCATTTTGTGCATGTGTATTttcataa 1671 0.4782 MKTSRYSSGNLCLAVAAVFILSLAPSSHGLGSGATLAISDASATVCGVVAGESTRRIECYRQGQVVPIVPDVSFSSISGGRDYFCGLRSSNSNLFCWSTTTSSFDRKRLYNDSSVPLENLAVGDTHVCATVVGGGTVRCWRTGDTFQRPSGSDQFASISSGYGFSCGILKNGFRVRCWGDTDVSNVVGQIENAFGNMSMLSLVAGGSYVCGLNSTGFLVCGGSSSSGQLDYPPGGAFEYGGLALGAKHGCAIRGLNGSVVCWGGNGEFSVNVTEGVSFEVIVSGSNFVCGLTTNNLTVVCWGPGWSNSSSFELPLPRVLPGPCVQSSCGECGSYLDSQSLCSGSNNICKPMTCRPQPTVPPPPSPSPSPPPSPSESPPPPPPLPLSPPSSSRSKTLTRGLLAFAIIGSVGGFAGICTIVYCLWTGVCFGKKKVHNSVQPTITRGSSGSNGGGASNNSGSSFGVVSLELLSGHKAIHKNENGLPRNVVDFVVPFIAQDEIHTASDQRVPPPTPFELVDVEFVGYLAADCVGLEGRDRPTMSQAVNNLERAFCACVFS 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1600 556 Gene3D - 239 346 IPR009091 -
Ssu9g1600 556 Gene3D - 27 238 IPR009091 -
Ssu9g1600 556 Gene3D Transferase(Phosphotransferase) domain 1 460 552 - -
Ssu9g1600 556 MobiDBLite consensus disorder prediction 356 391 - -
Ssu9g1600 556 PANTHER SERINE/THREONINE-KINASE CCR4-LIKE PROTEIN 461 553 - -
Ssu9g1600 556 PANTHER SERINE/THREONINE-KINASE CCR4-LIKE PROTEIN 10 457 - -
Ssu9g1600 556 SUPERFAMILY RCC1/BLIP-II 23 268 IPR009091 -
Ssu9g1600 556 MobiDBLite consensus disorder prediction 356 388 - -
Ssu9g1600 556 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 10 457 IPR044815 GO:0004674
Ssu9g1600 556 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 461 553 IPR044815 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1600 Ssu-Chr9 52528615 52532870 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1600 470 553 Receptor kinase-like Gene Family AT3G55950 43.956 3.68e-13 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1600 - - gmx:100786639 702.975