Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1586 ATGGCCTGGTTATGGCGCGCAGGTGCCAAGCTCTCTCTCGCTGCCTCCGCCGTGGGCGGCGGCGTCACGGCTGCGCTCATTGCCACCTCCGACGACCCCGAAACGGCGCTCAAGCTTTGCGCCACCGTCCCCCACCGCCTCTTCCGCGACGCCGTCACGGCCGCCAACATTGCTTTCGATTATGAATATTCACTGTGGGGACTCCCGGAAGGGAGTAGTGAGAGGGAGAGAATCAAGCATGAAGTTCACCTCCGGTCAGCGCAAAAACTTCAAGACCTGTGTTTTAAGAATGGAGGGGTTTATATAAAACTTGGACAACATCTTGGGCAGTTGgAATATTTAGTTCCTGAGGAATATGTTTGGACAATGAGGGAGTCGATGCTAAATAAATGTCCAGTTTCTTCGTATGAGCAAGTATGCAACGTATTCAAGAAAGAGCTTGGAGACACCCCTGATAAAATATTTTCCGAGTTCGATCCAGTCCCTATAGCAAGTGCTTCCCTTGCACAAGTTCATGTAGCTCGCATGCATGACGGTCAAAAAGTTGCTGTGAAGGTTCAGCATACTCACATGACTGATACTGCAGCTGCTGATCATGCCACTGTGGAATTGGTTGTGAACACATTGCATAGGTTTTTTCCCAGTTTTGATTATAGGTGGTTGGTTGATGAGATTAGTGAAAGTTTGCCCAAGGAATTGGACTTTTTAACTGAGGCAAAGAATAGTGAGAGGTGTTTGGAGAACTTCCACAAGTTGTCTCCTCATATTGCAAATTATGTATATGCACCAAAAGTATATTGGAATCTGAGTACCTCAAAGCTGCTAACAATGGAATTCATGGAGGGTGCTTATATAAATGACGTAAAGACCATTCAGAAACTTGGGATCAACCTGCACGAACTTTCAAAATTGGTTAGTCAAACTTTTGCTGAAATGATGTTCAAGCATGGGTTTGTGCATTGTGATCCGCATGCTGCTAACTTATTGGTTCGCCCATTGCCTTCCAGCAAAGCTAGCATTTTGGGCAGGAGAAAACCACAGTTGATCCTTTTAGACCATGGACTCTATAAGGAGCTTGACTTCCAAACAAGAACTAATTATGCTTCACTATGGAAGGCATTGATATTTGCTGATGCTAGTGCAATCAAGGAATACAGTACAAAGTTGGGTGCTGGGGAGGATTTATATGCACTTTTTGCTGGGGTTCTAACTATGAGGCCATGGAATAGAGTTGTTGACCGATCTATGGATCATTTAGTTATACAGGGAAATGAGAGTGACCGATTAGAACTGCAGATGTATGCTTCTCAATATTTCCATCAAATCTCGGAGCTTCTAAGGAGATTACCACGTGTGATTCTTCTAATGCTGAAGACAAATGACTGTTTACGAGCGGTCAATAATTCTCTGTTGCAGGGATCATCTTTGGAGACATTTTTAATCATTGGAAAGGTTTCTTCGGAGGCTGTCATTGAGGCAAAGATGTTGCAAAGCAAATCACTTTTAACTTGGTTGAACGTTAAATTGGATAAGATTTTGCTGGAAGTACGACTTTGGGGAATGCAGGTGGCCTTGTGGCTTTTACAACTAAGAAAGGCTTTGTCTTGGTCTAACCAAGCATTATAG 1626 0.4397 MAWLWRAGAKLSLAASAVGGGVTAALIATSDDPETALKLCATVPHRLFRDAVTAANIAFDYEYSLWGLPEGSSERERIKHEVHLRSAQKLQDLCFKNGGVYIKLGQHLGQLEYLVPEEYVWTMRESMLNKCPVSSYEQVCNVFKKELGDTPDKIFSEFDPVPIASASLAQVHVARMHDGQKVAVKVQHTHMTDTAAADHATVELVVNTLHRFFPSFDYRWLVDEISESLPKELDFLTEAKNSERCLENFHKLSPHIANYVYAPKVYWNLSTSKLLTMEFMEGAYINDVKTIQKLGINLHELSKLVSQTFAEMMFKHGFVHCDPHAANLLVRPLPSSKASILGRRKPQLILLDHGLYKELDFQTRTNYASLWKALIFADASAIKEYSTKLGAGEDLYALFAGVLTMRPWNRVVDRSMDHLVIQGNESDRLELQMYASQYFHQISELLRRLPRVILLMLKTNDCLRAVNNSLLQGSSLETFLIIGKVSSEAVIEAKMLQSKSLLTWLNVKLDKILLEVRLWGMQVALWLLQLRKALSWSNQAL 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1586 541 Pfam ABC1 atypical kinase-like domain 127 385 IPR004147 -
Ssu9g1586 541 PANTHER ABC1 FAMILY PROTEIN 7 532 - -
Ssu9g1586 541 CDD ADCK1-like 126 390 IPR045307 -
Ssu9g1586 541 Gene3D Transferase(Phosphotransferase) domain 1 224 373 - -
Ssu9g1586 541 PANTHER BNAC04G05270D PROTEIN 7 532 - -
Ssu9g1586 541 SUPERFAMILY Protein kinase-like (PK-like) 132 331 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1586 Ssu-Chr9 52187337 52192726 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1586 K08869 - gmx:100796182 1020.76