Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1584 ATGAGGATCACGCTGGAGCCGAGCCCGGAGCCAAGCCCAAGCCGCTCTCCAACTCCCAAAGACGAACTCGAATGGCTCCCACTTCCCAAGCACCCTCTCttcgccgccgccgccgccgcacACGGCGGCGCCACTTCCGCCGCTTCCCGGAACCTCCTGGCCTGGGACGGAGCCTCGCGCCTCTACTTCTGGGACTCAGACAGCCACTGCCTCCACCGGCTCTCTCTCCTACTCGGCGACCCCGATCCATCTTCCGTCCTCGCCGCTTCTCCCTCTAAGGTGTTGCAAGCGGACGCGGTGCTCGATTTCGATGTCCGCAAGATCTCCATCAACAGGAACGGAACGGCGATACTCCTTTTCGGTTCTGAAAGACTCTGTGTTATGTACCTCTATGGACGCACCGCTAAGAAGGACGTGAACTTGATTTGCAGGACTATTACTGTTGGTTCTCAGACATATTCCACTGGCGGCAATGATATTCGTGTGTTACAAGCATTATGGCACCCTTACAGTGATACTCATTTGGGAATTCTTTCTTCTGACTCAGTTTTCCGGCTTTTCAACCTGGCTGTGGATCCTTTGCAACCAGAGCAAGAATATTATTTACAGCCTGTTGAGCCTGGTAGATCTAGAAATGCCTCATCAGTGTGCCCAgttgatttttcttttgggGGAGACCACTTATGGGACAGGTTTAGTgtttttattttgtttagtgaTGGGGCCATCTTTGTACTGTGCCCAGTTGTTCCATTTGGAAGTCTCTTCAAATGTGAGTCTTTGTTAGAAATATACAATGATGCTCATACATTTGGAATAACATCAGCCAACTCTGTTGCGGCGAGTAATTCAAAATTGGCAATCTCCTGGTTAGAAGCAACATTTCCTGAGTTACAGAACCAAGGAACTGAAGGAGATAGCCTGTCTTTGCTAAGAGCTCATGCTTATGCTTTATTTGATGCATCTCTTGTCTTGCAGGGACCTCTGCAAAGAGTAGGTCAGGATGGGAATGAAGATTCAGTTGGTCGTAGTGCAGAATGTGAAGGTCGCGCAGCTAGTTTTCTCTACAATTTAGTCAGCAAAGACTCCATTTTGGTGACTGCCTGGAGTGGTGGGCAATTACAGATAGATGCTCTAGCTGATGAAATCCAACCTGTCTGGAGTGTTGGTAGTCCACCTAGTCTTCGCGTTGATTCTCATGACCAAATTCTTGGCCTTGCTATGATTTGTGAGTCAGTTGCCAGCAGCCCTCTGTGGAAGCTTGATCATAATGCCTGGTTGGGTAGTCCACCCCCTTTGCTGAGACTGGCTATTGTTGATTTGGCTCTGCCACGAAGAGCAGAAAGTGGTTATAGTATTTCATTGTTCATTGATACGCTTATGCCAGAAAGAATATATTCCCTTCATGATGGAGGGATTGACTCAATAGTTTTGCATTTTCTTCCATTTACAAGTCAGACAAATGGCAAGGACGATACAATGAAAACACCGTCTGTGCACCCTGTTCTAAATACTTGCCAGAGTGGATTCACCTCAGAGCCTTCACTCTGTGGCTTTGTGTCGTTATCAGATTCATTTGGATATTCATGGATTGTAGCTATTACTCTTTCTCAAGAGTGTGTTGTGCTTGAGATGAAAAGTTGGAACCTCTTGCTTCCAGTAAGCATTGATATGGGGAAGAAATCCATTCCATCAGAGGGGGGATCAAAAGAGAGAgacatatcaacaataattagCAAAGAACTACTTAGTGGACCCAAGGAGGTACTTGTTCCTCACGCCTCTCCAAGTTTGCGATCTGTTGCAGCTGATTCAATTGAAGGCCGATCAACATTACATCAGTATTTCAAGCTGTTTCATGAAACTTATGTGGAGTATGGACATAAGGTGTACCTGGAGCTCAAGCATCACGCACCTCAGTTGAAGAAAATCATTAATGACCAACATTCTCGTTTAGGCGATGCACAACAGAAACTTTTGAAAGTTGAGGAGAAAGAGGCTATATTACAGAAAAGGATAGATCGTGCAATTCAAATGCACAATTCTTTGGAAGAGCGGTTGCAACAATTAAGGAACTTACCCTGTGCTCACAAGAAACCACTGTCCAGAGCAGAGCGACAGTTTAAATCTGAGCTTGACCATTTCAAGGAAGTTGAGTTGAATGCTTTGCATTCTTCTGTTGATGCGCTAAGTGCAAGGCTGAGAAGGCACTTGCAAGCTTCAAAAGCTAATCACCAGCAACAGAAAATATCAGGGAAGAAAAGTAATGCCGGAGATGATCAGATATCCATGCTCAAATCATTGCTTGAAAAACTTTCACTTGTAAATACTGAAAATTCAAAGAAAGTTAAACTTGTGGAGTCTACATTGAGAAACAAAGACAGAAGCAGCAGAGAATCAAGCCTGCCTATGCTCTAA 2418 0.4396 MRITLEPSPEPSPSRSPTPKDELEWLPLPKHPLFAAAAAAHGGATSAASRNLLAWDGASRLYFWDSDSHCLHRLSLLLGDPDPSSVLAASPSKVLQADAVLDFDVRKISINRNGTAILLFGSERLCVMYLYGRTAKKDVNLICRTITVGSQTYSTGGNDIRVLQALWHPYSDTHLGILSSDSVFRLFNLAVDPLQPEQEYYLQPVEPGRSRNASSVCPVDFSFGGDHLWDRFSVFILFSDGAIFVLCPVVPFGSLFKCESLLEIYNDAHTFGITSANSVAASNSKLAISWLEATFPELQNQGTEGDSLSLLRAHAYALFDASLVLQGPLQRVGQDGNEDSVGRSAECEGRAASFLYNLVSKDSILVTAWSGGQLQIDALADEIQPVWSVGSPPSLRVDSHDQILGLAMICESVASSPLWKLDHNAWLGSPPPLLRLAIVDLALPRRAESGYSISLFIDTLMPERIYSLHDGGIDSIVLHFLPFTSQTNGKDDTMKTPSVHPVLNTCQSGFTSEPSLCGFVSLSDSFGYSWIVAITLSQECVVLEMKSWNLLLPVSIDMGKKSIPSEGGSKERDISTIISKELLSGPKEVLVPHASPSLRSVAADSIEGRSTLHQYFKLFHETYVEYGHKVYLELKHHAPQLKKIINDQHSRLGDAQQKLLKVEEKEAILQKRIDRAIQMHNSLEERLQQLRNLPCAHKKPLSRAERQFKSELDHFKEVELNALHSSVDALSARLRRHLQASKANHQQQKISGKKSNAGDDQISMLKSLLEKLSLVNTENSKKVKLVESTLRNKDRSSRESSLPML 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1584 805 PANTHER NUCLEOPORIN NUP84-RELATED 15 794 IPR037700 GO:0000055|GO:0000056|GO:0006913|GO:0017056
Ssu9g1584 805 MobiDBLite consensus disorder prediction 1 22 - -
Ssu9g1584 805 MobiDBLite consensus disorder prediction 739 758 - -
Ssu9g1584 805 Pfam Nuclear pore component 27 224 IPR019321 -
Ssu9g1584 805 Pfam Nuclear pore component 452 787 IPR019321 -
Ssu9g1584 805 Coils Coil 652 693 - -
Ssu9g1584 805 MobiDBLite consensus disorder prediction 741 758 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1584 K14318 - gmx:100801853 1436.4