LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ssu9g1578	ATGCTCTCTGCTACACTTCCCATGTCCCTTGCGTACGCCATGTCTGCAAAGGCCACCACAATGCAGCCCTTAGGCTTCTCTCGCCGCATGGTTCCTTCCGGCGGCCGTCTCTCTCCGGCGACACTCACCGGCGTTTCACTCTCACGCGCTCCTCTCACGTTGAGGTGCTCTTCACTCTCAATTCCTTCCCATgCTTTTGCAGTTGAGGAAGAAAGAAAGTTTGTAGAGGCTTCAAAGAATGGGAACTTGATTCCTCTCTGTCAGTGCATATTCTCTGACCAACTTACTCCAGTCCTTGCTTACCGGATGTTGGTTAAGGAGGATGATCGGGAGGCTCCAAGCTTTCTGTTTGAGTCTGCAGAGCCTGGTTATCATGCTTCGAGCGTCGGGCGCTATAGTGTTGTAGGAGCTCAACCAACAATGGAAGTTGTGGCAAAAGGCAATAAGGTTACAATAATTGACCATGAATCTGGGAATTTAACTGAGAAAATTGTTGATGATCCTATGATGATTCCCAGAAAAATCTCAGAGGGTTGGAAACCCTATCTCATTGATGAACTTCCAGATGCATTCTGTGGTGGTTGGGCAGGTTATTTCTCATATGACACAGTTCGCTAtgtggaaaagaaaaagttaccATTTTCAAATGCACCAGAGGATGACAGGAACCTTGCTGACATACATCTGGGCCTCTATGAGAATGTGACTGTGTTTGATCATGTTGAAAAGAAAGCATATGTGATTCTTTGGGTGAGGATTGATCGGTACTCCTCAGCTGAGAGTGCTTACAAGGATGGAATGGGACGATTAGAAAAATTAGTGGCCAGATTACAAGATGGCCAACCCCCAAGGTTGGCCCCAGGCTCTGTGGATTTAGCTACTCAGCATTTTGGTCCACCTTTAAAGAAGTCTAGCATGACAAGTGAAGCATACAAGGAGGCAGTCCTTCTGGCAAAAGAACATATTAAAGCAGGGGATATTTTCCAGATTGTATTAAGTCAGAGATTCGAACGAAGAACATTTGCTGATCCGTTTGAAATTTATAGAGCATTGAGAGTTGTGAACCCAAGTCCATATATGGCTTATTTGCAGGCTAGGGGATGTATTCTGGTTGCTTCAAGTCCAGAGATTCTTACGCGTATAAAGAAGAATAAGATTGTGAACCGTCCATTGGCCGGGACATCTAGAAGGGGGCAAAAACCCGAAGAAGATGAAAGGCTAGAAGCAATACTGCTGAGAGATGAAAAGCAGTGTGCCGAGCATGTCATGTTGGTTGATTTGGGACGCAATGATGTTGGAAAGGTTGCAAAAAATGGTTCTGTTAAAGTGGAAAAGCTCATGAATATTGAACGATATTCCCATGTCATGCACATAAGCTCAACGGTTATCGGAGAGTTGCAAGACACTTTGACTGGCTGGGATGCCCTGCGAGCTGCATTGCCTGTTGGAACTGTCAGTGGAGCACCaaagGTGAAGGCGATGGAGTTAATAGATGAGCTGGAGGTGACAAGGCGGGGGCCTTATAGTGGAGGATTTGGATACATCTCTTTCTGTGATGAAATGGACATTGCTCTTGCTCTGAGGACAATGGTATTTCCGACAGGACCAAGGTATGACACAATGTACTCATACAAAGACCTGAACCAACGCCGGGAGTGGATTGCTTACCTTCAAGCCGGTGCTGGTATAGTTGCTGACAGTGTCCCTGATGATGAGCACCAGGAGTGCCAAAACAAAGCTGCTGGTCTTGCTCGCGCCATTGACTTGGCTGAGTCCGCATTTGTTGATAAACGAATTTGA	1800	0.4556	MLSATLPMSLAYAMSAKATTMQPLGFSRRMVPSGGRLSPATLTGVSLSRAPLTLRCSSLSIPSHAFAVEEERKFVEASKNGNLIPLCQCIFSDQLTPVLAYRMLVKEDDREAPSFLFESAEPGYHASSVGRYSVVGAQPTMEVVAKGNKVTIIDHESGNLTEKIVDDPMMIPRKISEGWKPYLIDELPDAFCGGWAGYFSYDTVRYVEKKKLPFSNAPEDDRNLADIHLGLYENVTVFDHVEKKAYVILWVRIDRYSSAESAYKDGMGRLEKLVARLQDGQPPRLAPGSVDLATQHFGPPLKKSSMTSEAYKEAVLLAKEHIKAGDIFQIVLSQRFERRTFADPFEIYRALRVVNPSPYMAYLQARGCILVASSPEILTRIKKNKIVNRPLAGTSRRGQKPEEDERLEAILLRDEKQCAEHVMLVDLGRNDVGKVAKNGSVKVEKLMNIERYSHVMHISSTVIGELQDTLTGWDALRAALPVGTVSGAPKVKAMELIDELEVTRRGPYSGGFGYISFCDEMDIALALRTMVFPTGPRYDTMYSYKDLNQRREWIAYLQAGAGIVADSVPDDEHQECQNKAAGLARAIDLAESAFVDKRI	599

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ssu9g1578	599	PANTHER	ADC SYNTHASE SUPERFAMILY PROTEIN-RELATED	19	597	-	-
	Ssu9g1578	599	SUPERFAMILY	ADC synthase	81	591	IPR005801	GO:0009058
	Ssu9g1578	599	PRINTS	Anthranilate synthase component I signature	518	532	IPR019999	GO:0009058
	Ssu9g1578	599	PRINTS	Anthranilate synthase component I signature	409	422	IPR019999	GO:0009058
	Ssu9g1578	599	PRINTS	Anthranilate synthase component I signature	423	436	IPR019999	GO:0009058
	Ssu9g1578	599	PRINTS	Anthranilate synthase component I signature	503	517	IPR019999	GO:0009058
	Ssu9g1578	599	PANTHER	AMINOBENZOATE/ANTHRANILATE SYNTHASE	19	597	IPR019999	GO:0009058
	Ssu9g1578	599	Gene3D	Anthranilate synthase	62	596	IPR005801	GO:0009058
	Ssu9g1578	599	TIGRFAM	trpE_most: anthranilate synthase component I	92	587	IPR005256	GO:0000162\|GO:0004049
	Ssu9g1578	599	Pfam	chorismate binding enzyme	308	579	IPR015890	-
	Ssu9g1578	599	Pfam	Anthranilate synthase component I, N terminal region	93	247	IPR006805	GO:0009058

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ssu9g1578	Ssu-Chr9	52056071	52060724	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ssu9g1578	K01657		-	gmx:100790900	1053.12