Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1562 ATGGAAACAGGCATAGCATGCTACAACCGCGGGCCCTTCTTGCCTAGTGTTTCTTCCAAGCACTCTCCACCCTCCATCTCTCCATCTTTTGGTTTCAAGAGTCTGAAATCAAGCTCTTTATTTGGAGACTCGCTAAGAGTGGCATCCAAATCAACACTAAAGGTTTCAAAGGCAAAGGATACTTCACTTGTAACCAGATGTGAAATTGGTGACAGTCTGGAAGAATTCCTCACAAAAGCAACGCCAGATAAGGGGCTGATCAGGTTGTTGGTGTCCATGGGAGAAGCATTAAGAACAATTTCCTTCAAAGTGAAGACAGCTTCTTGTGGTGGAACACAATGTGTTAATACTTTTGGGGACGAGCAGCTTGCAGTGGATTTGCTGGCTAACCAGCTTCTTTTTGAGGCCTTAAATTACTCCCATTTCTGCAAGTATGCTTGCTCTGAAGAAAATCCTGAGCTCCAGGATATGGGAGGTCCAGTTGAAGGTGGATTTAGTGTTGCATTTGATCCCCTTGATGGCTCCAGCATTGTGGATACAAATTTCACAGTAGGCACCATCTTTGGCGTGTGGCCTGGGGATAAGTTGACTGGGGTCACCGGAAGAGATCAAGTTGCCGCAGCCATGGGGGTTATGGGTCCTAGAACCACATATGTGCTTGCTCTTAAGGACTTCGCTGGCACCCATGAATTTCTTCTGCTTGATGAAGGAAAATGGCAGCATGTCAAAGAGACCACAGAAATTGGTGAAGGAAAAATGTTCTCCCCAGGAAATTTGAGAGCCACATCTGATAATCCCGATTATGCCAAGTTGATCGATTACTATGTCAATGAAAAGTACACACTGAGATACACTGGAGGAATGGTGCCGGATGTCAACCAGattattgtaaaagaaaaaggcatCTTCACAAACGTGGCATCACCATCGGCCAAAGCCAAGCTGAGACTGTTGTTTGAGGTAGCTCCTTTGGGGTTCTTGATTGAAAAAGCTGGAGGTTACAGCAGTGATGGTCATCAGTCTGTGCTAGACAAAGTCATCACTAACATTGATGAGAGAACTCAAGTTGCTTACGGATCCAAGAATGAGATCATCCGGTTTGAAGAAACCCTGTATGGTAAATCCAGGCTCAAGGGTGGTGTAGCTGTTGGAGCAGCTGCTTAA 1164 0.4485 METGIACYNRGPFLPSVSSKHSPPSISPSFGFKSLKSSSLFGDSLRVASKSTLKVSKAKDTSLVTRCEIGDSLEEFLTKATPDKGLIRLLVSMGEALRTISFKVKTASCGGTQCVNTFGDEQLAVDLLANQLLFEALNYSHFCKYACSEENPELQDMGGPVEGGFSVAFDPLDGSSIVDTNFTVGTIFGVWPGDKLTGVTGRDQVAAAMGVMGPRTTYVLALKDFAGTHEFLLLDEGKWQHVKETTEIGEGKMFSPGNLRATSDNPDYAKLIDYYVNEKYTLRYTGGMVPDVNQIIVKEKGIFTNVASPSAKAKLRLLFEVAPLGFLIEKAGGYSSDGHQSVLDKVITNIDERTQVAYGSKNEIIRFEETLYGKSRLKGGVAVGAAA 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1562 387 Hamap Fructose-1,6-bisphosphatase class 1 [fbp]. 71 373 IPR000146 GO:0005975|GO:0016791
Ssu9g1562 387 CDD FBPase 69 371 IPR000146 GO:0005975|GO:0016791
Ssu9g1562 387 PANTHER FRUCTOSE-1,6-BISPHOSPHATASE-RELATED 72 374 IPR000146 GO:0005975|GO:0016791
Ssu9g1562 387 PANTHER SEDOHEPTULOSE-1,7-BISPHOSPHATASE, CHLOROPLASTIC 72 374 - -
Ssu9g1562 387 Pfam Fructose-1-6-bisphosphatase, C-terminal domain 250 370 IPR044015 -
Ssu9g1562 387 ProSitePatterns Fructose-1-6-bisphosphatase active site. 313 325 IPR020548 GO:0005975|GO:0042578
Ssu9g1562 387 PRINTS Sedoheptulose-1,7-bisphosphatase family signature 252 268 IPR023079 GO:0005975|GO:0016791
Ssu9g1562 387 PRINTS Sedoheptulose-1,7-bisphosphatase family signature 198 216 IPR023079 GO:0005975|GO:0016791
Ssu9g1562 387 PRINTS Sedoheptulose-1,7-bisphosphatase family signature 282 302 IPR023079 GO:0005975|GO:0016791
Ssu9g1562 387 PRINTS Sedoheptulose-1,7-bisphosphatase family signature 344 368 IPR023079 GO:0005975|GO:0016791
Ssu9g1562 387 PRINTS Sedoheptulose-1,7-bisphosphatase family signature 138 158 IPR023079 GO:0005975|GO:0016791
Ssu9g1562 387 PRINTS Sedoheptulose-1,7-bisphosphatase family signature 122 137 IPR023079 GO:0005975|GO:0016791
Ssu9g1562 387 SUPERFAMILY Carbohydrate phosphatase 67 370 - -
Ssu9g1562 387 Pfam Fructose-1-6-bisphosphatase, N-terminal domain 64 244 IPR033391 -
Ssu9g1562 387 Gene3D - 245 386 - -
Ssu9g1562 387 Gene3D - 68 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1562 Ssu-Chr9 51746582 51749445 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1562 K01100 - gmx:100786122 727.628