Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1559 ATGCCAAAAGGGATGGCTTCAGTCCCCACATTTTCACTAATGTTACAGTTTCTGTTCTTAATATTATGTTCGTTTAACCAGCTAAGCTTGGCTTTCACAAGCCAAGAGTACCACGAGGCTCTTGGGAAATCCATTCTCTTCTTTGAGGGACAACGATCTGGAAAATTGCCTTCCAACCAGCAACTAACATGGAGGGGAGATTCTGGATTGTCCGATGGCTCTTCTTATCATGTGGACCTAGTAGGAGGTTATTATGATGCTGGAGACAACGTTAAGTTTGGGTTGCCAATGGCCTTTACCACTACATTATTAGCATGGAGTGTGATTGAATTTGGAAGCTCAATGCAGGACCAGATTGAAAACGCTAGAGCTGCTATCCGGTGGGGCACGGATTACCTTCTTAAGGCAGCCACCACCACCCCTGACACATTATATGTCCAAGTAGGAGACCCGAACATGGATCACAAGTGTTGGGAAAGGCCTGAAGATATGGACACTCCGCGCAACGTGTACAAGGTATCAGCTCAAAACCCAGGATCGGATGTAGCAGCAGAGACGGCAGCTGCATTGGCAGCTTCTTCAATAGCATTCAAAGATTCGGATCCCAGCTATTCCTCCAAATTGCTTCAAGCAGCCatcaaaGTATTCAATTTTGCAGACCGTTACAGGGGTTCTTACAGTGACTCTCTTAATTCGGCTGTCTGTCCATTCTACTGCTCTTACTCTGGATACCATGATGAGCTTCTGTGGGGTGCATCGTGGATTTATAGAGCCTCGGGAATTCGCTCATACATACAATATGTACAATCCAACGGCGCTGATGATGATGGTTACACCTTCAGTTGGGATGACAAGCGACCTGGAACAAAAATTCTGCTTTCCAAGGAATTCCTGGAGAAAAATTCCGAAGAGTTCCAATTATACAAGGCACATGCAGACAAATACATTTGTTCGCTAATGTCGGGAACACCTGGTTTCCAGGCTCAGTACACCCGAGGGGGGCTTCTGTACAAAGGGAGTGAGAGCAATTTGCAGTATGTGACATCGACGACGTTCCTTCTCTTGACATACGCCAAGTATCTGAACGCAAACGGGGGTGTTGTCTCATGTGGGAGTTCAACAGTCAAGGGCCAAAGCCTTATAACACTAGCTAAAACACAAGTGGATTACATTTTGGGCAATAATCCAACAAAGATGTCTTATATGGTGGGCTTTGGGGAGAGGTATCCAAAGCATATCCACCACAGGGGTTCCTCTCTACCTTCCATTCATGCGCAGTCTCAACACATTTCCTGTAACGACGGATTTCAATATCTCCGTTCAGGATCACCCAATCCAAATGTCCTTGTTGGAGCTGTAGTAGGTGGTCCCGATAGCAATGACAATTTCTCTGATGATCGAAATAACTATCAGCAGTCAGAGCCAGCAACATACATCAATGCACCGTTCGTAGGCGCTCTTGCCTATTTCTCTGCCAAACCCTCAAGCTATTAG 1494 0.4578 MPKGMASVPTFSLMLQFLFLILCSFNQLSLAFTSQEYHEALGKSILFFEGQRSGKLPSNQQLTWRGDSGLSDGSSYHVDLVGGYYDAGDNVKFGLPMAFTTTLLAWSVIEFGSSMQDQIENARAAIRWGTDYLLKAATTTPDTLYVQVGDPNMDHKCWERPEDMDTPRNVYKVSAQNPGSDVAAETAAALAASSIAFKDSDPSYSSKLLQAAIKVFNFADRYRGSYSDSLNSAVCPFYCSYSGYHDELLWGASWIYRASGIRSYIQYVQSNGADDDGYTFSWDDKRPGTKILLSKEFLEKNSEEFQLYKAHADKYICSLMSGTPGFQAQYTRGGLLYKGSESNLQYVTSTTFLLLTYAKYLNANGGVVSCGSSTVKGQSLITLAKTQVDYILGNNPTKMSYMVGFGERYPKHIHHRGSSLPSIHAQSQHISCNDGFQYLRSGSPNPNVLVGAVVGGPDSNDNFSDDRNNYQQSEPATYINAPFVGALAYFSAKPSSY 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1559 497 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 463 481 IPR033126 -
Ssu9g1559 497 PANTHER ENDO-1,4-BETA-GLUCANASE 15 493 - -
Ssu9g1559 497 PANTHER ENDOGLUCANASE 4 15 493 - -
Ssu9g1559 497 Pfam Glycosyl hydrolase family 9 37 487 IPR001701 GO:0004553|GO:0005975
Ssu9g1559 497 Gene3D - 32 496 IPR012341 GO:0005975
Ssu9g1559 497 SUPERFAMILY Six-hairpin glycosidases 35 493 IPR008928 GO:0005975
Ssu9g1559 497 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 390 416 IPR018221 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1559 Ssu-Chr9 51698967 51702955 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1559 34 491 Glycoside Hydrolase AT1G02800 63.853 0.0 597
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1559 - - gmx:732658 911.368