Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1550 ATGGGTAACGGCATGAGACAAAGAAAGAGTCATCGTCCCATCGAAACGCTGCGGCATGGTTGCATTGTCCCTCTTCATCTTCTGTTCCTAATCCTCCTCGTCCAACCTTCTTCTTCCTCCACGCAGCCCCCCAGTTTCGACCCCGACAACATCGACCTCTTCGGCGACGCCCACGTCGTCGTCGCCGCCGACGGCGTCTCCCACGTGCGACTCACGCGCCCCGCCCCCTCCTCCTCCGGCCTCCTCCGCCGCCGCGAGCCCCTCGCTTTCGCCGGCGCCGCCTCCCTCTCCACCGAGTTCTCCTTCTCCGTCTCCCCCGCCGCCGGAGACggtctcctcctcctcctcgcCCCCGCCCCCGCCGCCGCGTTCCCCGGTAACGGTTCCGATTATGTCGGCGTGGAGTTCGACACGTCGAAGGATGACAGTGTCGGTGATGTAAACGCGAACCGCGTGGGCATCGATGTGGGAAGCCACGTGTCAGTCGCGGTCGCGAATGTTTCGGATGCGAATTTGGTTCTCAATAATGGGGAAAAGTTGAACGCTTGGGTTGATTACGAGGGTAGTTCTAAGGTGTTGGAAGTTAGGTTAAGTAAATGGGGAGAACAAAGGCCCCCTGATCCCATTGTTTCTCATTCAATTGATTTTGTTAAGATTTGGGGTGGAGATCCTGTGTTTGCGGGTATAAGTTCTTCCAATGGTGCCAATTCGGCGCAGGTTGTTAGTGTCTATTGGTGGAGGCTTAGTTTGAGGGAGGTTGCAAAGGGGTTGCATTCTCTACCTGCGGATCCACATGGTAATAAGTTTGAGGATAAGCATACGAAGTTGTGTCCCTTGACGGTTCTTGCTGGGGTGATTTTCGGAACTGGGTGTGTTGCGTTGGTCACGTTTGTGGTGCTGTTTATGTGGGTGATTTTTTTCCATGGGCGTCAAGAGGAGTCTCTTGTGAAAATCCCTGACCACCCTTCGGATATCAGGTATGAAAGAATTGATGTGGCTGTTGACAAGAATGCGCAAGATGATGAAAGTTAG 1032 0.5339 MGNGMRQRKSHRPIETLRHGCIVPLHLLFLILLVQPSSSSTQPPSFDPDNIDLFGDAHVVVAADGVSHVRLTRPAPSSSGLLRRREPLAFAGAASLSTEFSFSVSPAAGDGLLLLLAPAPAAAFPGNGSDYVGVEFDTSKDDSVGDVNANRVGIDVGSHVSVAVANVSDANLVLNNGEKLNAWVDYEGSSKVLEVRLSKWGEQRPPDPIVSHSIDFVKIWGGDPVFAGISSSNGANSAQVVSVYWWRLSLREVAKGLHSLPADPHGNKFEDKHTKLCPLTVLAGVIFGTGCVALVTFVVLFMWVIFFHGRQEESLVKIPDHPSDIRYERIDVAVDKNAQDDES 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1550 343 Gene3D - 40 258 - -
Ssu9g1550 343 PANTHER LEGUME LECTIN BETA DOMAIN PROTEIN 22 342 - -
Ssu9g1550 343 SUPERFAMILY Concanavalin A-like lectins/glucanases 39 250 IPR013320 -
Ssu9g1550 343 Pfam Legume lectin domain 45 255 IPR001220 GO:0030246
Ssu9g1550 343 PANTHER CONCANAVALIN A-LIKE LECTIN FAMILY PROTEIN 22 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1550 Ssu-Chr9 51598070 51601258 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1550 55 335 Receptor kinase-like Gene Family AT5G03140 29.429 7.23e-23 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1550 - - gmx:102669260 422.55