Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1544 ATGGAGGAAAATTGGAGAGGTAAAGGGCACAGATTGTTGCTGATGCCATCACCGTTACAAGGCCACATAACACCTTTCCTCCACCTAGGCGACATCCTCTACTCAAAGGGCTTCTCCATCACCATCGTCCACACCATCTACAACTCCCCGGACCCTTCTTCCTACCCTCACCTCGCCTTCCACGCCATCCCTGACGGCTTGTCCGAAACAGAAGCCACGACACTTGACGCCGTAACCATCACCGACCTCATCAACATCAGATGCGCGCACCCTTTGAAGGAATGGTTGGCTGAGGAGCTGTCTCGGTCGCAGCAACCCGTTCCTTGCTTCATCGCCGATGTCTCCCTTCATTTCATTAAACCTGTCTGCGACGAGTTGAAGCTCCCGCGCCTCGTGCTCAGAACTGGTGGGGCATcctcttttcttgtttttgccTCATTTCCCCTCCTTAAAGAAAAGGGTTACCTCCCCGTACAAGAATCTCGATTGGAAGAGCCTGTGGAGGATCTTCCACCACTAAAAGTGAAAGACCTTCCTAAGTTTCAGTCGCAGGATCCTGAGGCATTCTATAAACTAGTTTGTCAATTTGTTGAGGAATGCAAGGCATCTTCAGGGATTATTTGGAACACCTTTGAAGATTTGGAATCATCTGCATTGACAAAACTGCGCCAAGATTTTTCCATACCAATATACCCTATAGGTCCTTTTCACAAACACTTTCTTACAGGTTCAACTTCTTCTACTAGCTTGTTGACCCCAGACAAAAGCTGCATGTCTTGGTTGGACAGACAAGAACGTAACAGTGTTGTTTATGTGAGTTTTGGGAGTATTGCAGCAATAAGTGAGGCTGAGTTCTTGGAGATAGCTTGGGGGTTAGCCAACAGCAAGCAGCCATTCTTGTGGGTGATTCGACCCGGGTTAATCCGTGGCTCAGAATGGCTTGAACCATTGCCAAGTGGGTTCCTAGAGAATTTGGGAGGAAGAGGCTACATTGTCAAATGGGCTCCTCAAGAGCTAGTGCTGAGCCATCCTGCAGTGGGAGCATTTTGGACTCATAATGGTTGGAACTCAACTTTGGAGAGCATATGTGAAGGGGTTCCAATGATTTGTATGCCATGTTTTGCTGACCAAAAGGTCAATGCCAAATATGCAAGCAGTGTTTGGAAGGTTGGGGTGCCATTACAGAATAAGCTAGAAAGAGGAGAGATAGAGAAGACCATTAAAAAACTAATGGTTGGGGATGAAGTGAATGAGATTAGAGAGaatgctttaaatttaaaggaaaaggCAAGTGCTTGCTTGAAAGAAGGCGGTTCGTCTTTCTGTTTTCTTGATAGCTTGCTTAGTGACATATTGTCACTGGAATCTTCTACATTTAGAGCTCACTGA 1389 0.4536 MEENWRGKGHRLLLMPSPLQGHITPFLHLGDILYSKGFSITIVHTIYNSPDPSSYPHLAFHAIPDGLSETEATTLDAVTITDLINIRCAHPLKEWLAEELSRSQQPVPCFIADVSLHFIKPVCDELKLPRLVLRTGGASSFLVFASFPLLKEKGYLPVQESRLEEPVEDLPPLKVKDLPKFQSQDPEAFYKLVCQFVEECKASSGIIWNTFEDLESSALTKLRQDFSIPIYPIGPFHKHFLTGSTSSTSLLTPDKSCMSWLDRQERNSVVYVSFGSIAAISEAEFLEIAWGLANSKQPFLWVIRPGLIRGSEWLEPLPSGFLENLGGRGYIVKWAPQELVLSHPAVGAFWTHNGWNSTLESICEGVPMICMPCFADQKVNAKYASSVWKVGVPLQNKLERGEIEKTIKKLMVGDEVNEIRENALNLKEKASACLKEGGSSFCFLDSLLSDILSLESSTFRAH 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1544 462 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 260 414 IPR002213 GO:0008194
Ssu9g1544 462 Gene3D Glycogen Phosphorylase B; 252 432 - -
Ssu9g1544 462 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 11 452 - -
Ssu9g1544 462 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 6 455 - -
Ssu9g1544 462 PANTHER CYTOKININ 7-BETA-GLUCOSYLTRANSFERASE-RELATED 6 455 - -
Ssu9g1544 462 Coils Coil 416 436 - -
Ssu9g1544 462 Gene3D Glycogen Phosphorylase B; 12 438 - -
Ssu9g1544 462 CDD GT1_Gtf-like 11 432 IPR002213 GO:0008194
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1544 Ssu-Chr9 51519681 51521851 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1544 1 459 Glycosyltransferase AT3G55700 50.641 6.00e-168 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1544 - - gmx:100783133 814.298