Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1543 ATGGTTTTTCCATCACCATCATCCACACGAGTTTCAACTCCCCTAACCCTTCAAACTACCCTCACTTCAACTTCTGTTGCATCCAAGACGCGCCTTTCAAGGAGTGCACTGGGAAAGCTACTGTCCGATGAATCCGAGGAACCTGTTGCGTGCCTGATCTCAGATGCTTTGTGTTACTTCACTCAGGCCGTTGCCGACAGCCTTCGGCTCCCAAGGATTGTGTTGAGAACTGGAGGAGTATCTTCCTTCGTTGCTTTCGCCGCCTTTCcattgttgagagaaaaaggTTATATACCCATACAAGAATGTAAATTGGAGGAGGCAGTGGCAGAGCTACCACCACTCAGAGTGAAAGACTTGCCTATGATTAAGACAGAGGAGCCAGagaaatattatgaattattacgCAGGTTTGTCAAGGAAACCAAGGGCTCCTTAGGAGTGATTTGGAACTCCTTTGTAGAGTTGGAATCATCTGCACTGGCAACACTGAGTCAAGAGTTTTCCATACCAATGTTCCCAATAGGTCCCTTTCACAAGTACTATCCTGATTCCTCTTCTTGCAGCAGCTTGATATCCCAAGACCAAAGTTGCATCTCCTGGTTAGACAAGCACACACCCAACTCTGTGGTCTATGTGAGTTTTGGGAGTGTTGCTACAATAACTGAGACTGAGATCTTAGAGATAGCTTGGGGTTTAGCCAATAGCAACAACCCATTTTTGTGGGTGGTTCGACCGGGCCTGATCAAGGGCTCGGAATGGCTTGAACCCCTGCCAAGTGGGTTCATGGAGAATTTGGAAGGCCGAGGCCTCATAGTGAAATGGGCTTCTCAGCAAGAAGTGTTGGCCCACTCAGCAATAGGTGCATTTTGGACTCATAATGGTTGGAATTCAACCTTGGAGAGTATTTGTGAAGGGGTTCCTATGATATGCATGCCTTGTTTCACAGACCAAAAAGTGAATGCGAGGTATGTTAGCCATGTTTGGAGGATTGGCCTGCAGTTAGAGAAGGGAGTTGAGAGAGGAGAAATAGAAAGGACCATTAGAAGATTGATGGATGTCAATGTTGAGGGAAGGAGATTAGAGATGGAGCCTTAA 1098 0.4526 MVFPSPSSTRVSTPLTLQTTLTSTSVASKTRLSRSALGKLLSDESEEPVACLISDALCYFTQAVADSLRLPRIVLRTGGVSSFVAFAAFPLLREKGYIPIQECKLEEAVAELPPLRVKDLPMIKTEEPEKYYELLRRFVKETKGSLGVIWNSFVELESSALATLSQEFSIPMFPIGPFHKYYPDSSSCSSLISQDQSCISWLDKHTPNSVVYVSFGSVATITETEILEIAWGLANSNNPFLWVVRPGLIKGSEWLEPLPSGFMENLEGRGLIVKWASQQEVLAHSAIGAFWTHNGWNSTLESICEGVPMICMPCFTDQKVNARYVSHVWRIGLQLEKGVERGEIERTIRRLMDVNVEGRRLEMEP 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1543 365 CDD GT1_Gtf-like 44 353 IPR002213 GO:0008194
Ssu9g1543 365 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 27 361 - -
Ssu9g1543 365 PANTHER UDP-GLYCOSYLTRANSFERASE 76C2-LIKE 27 361 - -
Ssu9g1543 365 Gene3D Glycogen Phosphorylase B; 193 354 - -
Ssu9g1543 365 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 50 332 IPR002213 GO:0008194
Ssu9g1543 365 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 15 353 - -
Ssu9g1543 365 Gene3D Glycogen Phosphorylase B; 27 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1543 Ssu-Chr9 51500691 51503890 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1543 47 360 Glycosyltransferase AT3G55700 58.544 1.99e-131 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1543 - - gmx:100796525 562.762