Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1531 ATGGAGATGAGAAAGGGAGGTAGAAtagaagaaagtgaagagaaatgGGTGCATGATGCATCTGTAGATTATAAAGGCAGAGTTCCTCTCCGTGCTTCAACTGGTGTATGGAAAGCCTCCCTCTTTGTCCTCACAATTGAATTTAGTGAAAGGGTAAGCTACTTTGGGATAGCCACTAATCTTATATCGTACCTGACTAAAGTGATACATGAAGACCTCAAAACAGCGGCCAAGAATGTAAACTACTGGTCAGGAACAACAACCCTGATGCCTCTGGTTGGGGGATTTCTTGCTGATGCCTACACTGGTCGATTTTATATGGTCCTGTTTTCTTCCTTTGTATACCTTATGGGATTAATCCTGTTGACCATGTCTCAATTCATCCCAAATCTAAAGCCATGCAACACTAAGATATGCCATCAGCCTAGGAAGGTTCATGAAGTGGTTTTCTTCCTGGCCCTTTACTGTATCTCCTTGGGTACTGGAGGATACAAACCATGCTTGGAAAGCTTTGGAGCTGACCAATTTGATGATGATCACTtggaagaaaggaagaagaagatgtcTTTCTTCAACTGGTGGAACTTTGCCCTGTGCTTTGCATTGCTGCTTGGTGCAACAGTGTTTGTTTATGTTCAAGACTTTGTCAGCTGGGGAGTGGCTAGTCTTATCCTCACTATTCTTATGGCTCTCACTGTCATAGCTTTCTGTGTGGGAAAACCTTTCTACAGGTACAGGAGGCCAGAAGGAAACCCTTTAACGCCAATTTTACAGGTCTTAATTGCAGCAATAAGGAAAAGGAATCTGTCCTGTCCTTCAAATCCTGCTTTATTGCATGAGGTCCCAGAGTCAGAGAAGTCCCAAGGAAGGCTTCTGAGCCACACTAGCAGTCTCAGGTTCCTAGACAATGCTGCGatagttgaagagaaatatgtTGAGCAGAAAGACAATCCATGGAGATTAGCGACAGTAACAAGAGTGGAGGAAACAAAACTTGTTCTAAATGTAGTTCCCATATGGCTAACTTCATTAACAGCTGGAGTATGTGTCGCACAAGGCACTACACTCTTTGTCAAACAAGCAGCTGCTATGAACTTAAAGATAAGCAAAAGTTTCAAAATCCCACCAGCTTCCATGGCCTCTATTGCAGCTGTTGGTACCTTAATATCTGTCCCaatatatgataagattattgTTCCAATTCTGAGGAAGGTCACTGGTAATGAAAGAGGCATCAACATCCTTAGGAGGATCAGCGTTGGCTTGACATTATCAGTCATACTCATGGTTGTTGCTGCCTTAGTAGAAGCAAAGAGACTAAGAATGGAAACTAGGCATAAGACTATGAGTGTGTTGTGGTTGATACCCCAATACTTGATTATTGGCATTGCAGATTCATTTTCTCTAGTTGGTTTGCAAGAGTATTTCTATGACCAAGTTCCTGACTCAATGAGAAGCTTGGGAATGGCTTTATATCTAAGTGTGCTTGGACTAGGAAGCTTCTTAAGTAGCTTTTTAATCATCATTGTAGACCATGTCACGGAGAAGAATGGCGAAAGTTGGATTGGAAAGGATATAAATTCAAGTCGTTTGGATAGGTTTTATTGGATGTTAGCTGTTATAAATGCTTTGGATTTGTGTGTCTTTCTCTTCATGGCAAAAAGGTACACTTATAAGACCGTACAGAGGAGAGTTATAGAAACTGATTGTTGTAAGAATGATGGGGTAGAGATGGCGGCTTGA 1743 0.401 MEMRKGGRIEESEEKWVHDASVDYKGRVPLRASTGVWKASLFVLTIEFSERVSYFGIATNLISYLTKVIHEDLKTAAKNVNYWSGTTTLMPLVGGFLADAYTGRFYMVLFSSFVYLMGLILLTMSQFIPNLKPCNTKICHQPRKVHEVVFFLALYCISLGTGGYKPCLESFGADQFDDDHLEERKKKMSFFNWWNFALCFALLLGATVFVYVQDFVSWGVASLILTILMALTVIAFCVGKPFYRYRRPEGNPLTPILQVLIAAIRKRNLSCPSNPALLHEVPESEKSQGRLLSHTSSLRFLDNAAIVEEKYVEQKDNPWRLATVTRVEETKLVLNVVPIWLTSLTAGVCVAQGTTLFVKQAAAMNLKISKSFKIPPASMASIAAVGTLISVPIYDKIIVPILRKVTGNERGINILRRISVGLTLSVILMVVAALVEAKRLRMETRHKTMSVLWLIPQYLIIGIADSFSLVGLQEYFYDQVPDSMRSLGMALYLSVLGLGSFLSSFLIIIVDHVTEKNGESWIGKDINSSRLDRFYWMLAVINALDLCVFLFMAKRYTYKTVQRRVIETDCCKNDGVEMAA 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1531 580 SUPERFAMILY MFS general substrate transporter 35 559 IPR036259 -
Ssu9g1531 580 Pfam POT family 107 518 IPR000109 GO:0016020|GO:0022857|GO:0055085
Ssu9g1531 580 PANTHER OS03G0204700 PROTEIN 22 562 - -
Ssu9g1531 580 CDD MFS_NPF5 37 558 IPR044739 GO:0042937|GO:0042938|GO:0071916
Ssu9g1531 580 Gene3D MFS general substrate transporter like domains 8 565 IPR036259 -
Ssu9g1531 580 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 22 562 IPR000109 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1531 Ssu-Chr9 51225033 51227809 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1531 11 562 Organic Solute Cotransporters AT3G53960 58.897 0.0 726
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1531 - - gmx:102660397 1007.67