Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1530 ATGGAGCAGGAAATGGAGAAGAGAAAACGAGGTAAAAGGGGAGACAATGAAGAAGAGAAATGGGTGCATGATGCATCTGTGGATTATAAGGGCAGAGTTCCTCTGCGTGCTTCCACGGGTGTATGGAAAGCTTCGCTTTTTGTCCTAGCAATTGAATTTAGCGAAAGAATAAGCCACTTTGGGATATCCAGTAATCTTATCACGTACCTGACTAAAGTGATGCATGAAGACCTCAATACAGCAGCCAAGAATGTAAACTACTGGGCAGGAGCAACAACCTTGATGCCTCTAATTGGGGGATTTGTTGCTGATGCCTACACTGGTCGATTTAGTATGGTCCTCTTTTCTTCCCTCATATACCTGAAGggtggaaataggccagaCGGCTTGTCAAAAGCCCGTAGCTTGGCCTGTGTAAGGCCTAGCCTAATCTggctcatttattaa 447 0.4206 MEQEMEKRKRGKRGDNEEEKWVHDASVDYKGRVPLRASTGVWKASLFVLAIEFSERISHFGISSNLITYLTKVMHEDLNTAAKNVNYWAGATTLMPLIGGFVADAYTGRFSMVLFSSLIYLKGGNRPDGLSKARSLACVRPSLIWLIY 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1530 148 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 22 123 IPR000109 GO:0016020|GO:0022857|GO:0055085
Ssu9g1530 148 Gene3D MFS general substrate transporter like domains 13 124 IPR036259 -
Ssu9g1530 148 PANTHER PROTEIN NRT1/ PTR FAMILY 5.6 22 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1530 Ssu-Chr9 51184001 51187169 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1530 16 123 Organic Solute Cotransporters AT3G53960 60.185 5.06e-46 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1530 - - gmx:100804663 221.09