Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1525 ATGGCTCTTTCACCACTCACCATGCTTGTGGTCATTGCCACCGTCTTCCTCCCATCCATTGCTATGGCCAAGGAATTTGTAGTTGGGGATGATCATGGATGGACAATAGGGTTTAATTACACTGCCTGGGCTGCTGATAAGACATTCCAAGTTGGGGACATACTTGTATTCAAGTATGCTGTTGGAGAACACAACGTGTTCAAAGTGAATGGAACTTCATTCCAGAGCTGCACGGTTCCTCCACCAAGTGAAGCATTGTCTACTGGAAGTGACCGTATTTTATTGGCAACCCCTGGCAGAAAATGGTACATATGTGGTGTGGCCGGTCATTGCAACGCTGGGCAAAAGCTTGTTATTACAGTTCAACCCCAAACACTGCCTCCAACTCTACCACCATCACCTGCCCCTGCACCTTCACCTCTTCAACATCGGCCTCATTTTGAAATTAAGTTGTCTGTTATGGCTCTTTCACCACTCAGCATGCTTGTGGTCATTGCCACCATCCTCCTCCCATCCATTGCTATGGCCAAGGAATTTGTAGTTGGGGATGATCATGGATGGACAACACGGTTTGATTACACAGCTTGGGCCGCAGATAAGACCTTCCAGGTTGGAGACATACTTGTATTCAAGTATGCTGTTGGAGAACACAACGTGTTCAAAGTGAATGGAACTGCATTCCAGAGCTGCACGGTTCCTCCACCAAGTGAAGCATTGTCTACTGGAAGCGACCGTATTGTTTTGGCAACTCCTGGCAGAAAATGGTACATATGTGGTGTTGACGATCACTGCACTCATGGCCAAAAGCTTGTTATTACAGTTCAACCCCAAACACTGCCTCCAACTCTACCACCATCACCTGCCCCTGCACCTTCACCTCTTCAACACCGACCTCATTTTGGTCGATGGGTGCCTAAGAAGctatttacaatatttcatTAA 942 0.466 MALSPLTMLVVIATVFLPSIAMAKEFVVGDDHGWTIGFNYTAWAADKTFQVGDILVFKYAVGEHNVFKVNGTSFQSCTVPPPSEALSTGSDRILLATPGRKWYICGVAGHCNAGQKLVITVQPQTLPPTLPPSPAPAPSPLQHRPHFEIKLSVMALSPLSMLVVIATILLPSIAMAKEFVVGDDHGWTTRFDYTAWAADKTFQVGDILVFKYAVGEHNVFKVNGTAFQSCTVPPPSEALSTGSDRIVLATPGRKWYICGVDDHCTHGQKLVITVQPQTLPPTLPPSPAPAPSPLQHRPHFGRWVPKKLFTIFH 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1525 313 SUPERFAMILY Cupredoxins 175 275 IPR008972 -
Ssu9g1525 313 CDD Phytocyanin 24 121 - -
Ssu9g1525 313 MobiDBLite consensus disorder prediction 278 298 - -
Ssu9g1525 313 PANTHER BLUE COPPER PROTEIN 9 131 IPR039391 GO:0009055
Ssu9g1525 313 PANTHER BLUE COPPER PROTEIN 162 284 IPR039391 GO:0009055
Ssu9g1525 313 CDD Phytocyanin 177 274 - -
Ssu9g1525 313 Pfam Plastocyanin-like domain 34 115 IPR003245 GO:0009055
Ssu9g1525 313 Pfam Plastocyanin-like domain 187 268 IPR003245 GO:0009055
Ssu9g1525 313 Gene3D - 22 126 IPR008972 -
Ssu9g1525 313 Gene3D - 175 279 IPR008972 -
Ssu9g1525 313 ProSiteProfiles Phytocyanin domain profile. 24 123 IPR003245 GO:0009055
Ssu9g1525 313 PANTHER BLUE COPPER PROTEIN-LIKE 9 131 - -
Ssu9g1525 313 PANTHER BLUE COPPER PROTEIN-LIKE 162 284 - -
Ssu9g1525 313 SUPERFAMILY Cupredoxins 22 122 IPR008972 -
Ssu9g1525 313 ProSiteProfiles Phytocyanin domain profile. 177 276 IPR003245 GO:0009055
Ssu9g1525 313 MobiDBLite consensus disorder prediction 278 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1525 Ssu-Chr9 51082772 51086435 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1525 181 298 Miscellaneous Gene Families AT2G31050 40.299 9.79e-24 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1525 - - vri:117928252 333.954