Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1517 ATGAGTACACATAGTATGTTGGATATTGTTTTAAATGATATACTTCGGGTGGTCACGCCATCACAAGAAGATTGGGAGATACGATTTgcaattattaatgatttacGAAGCATTGTTGAATCTGTGGAAAGCCTGAGAGGAGCAACTGTTGAACCATTTGGGTCATTTGTATCTAGTCTCTTCACACGATGGGGCGACTTGGATATTTCAATTGAGCTATCAAATGGTTTGCATATTTCATCTGCtgggaaaaaacaaaaacaaactttaTTGGGGGATCTTTTAAAAGCTTTGAGAATGACAGGTGGAGGGAGCAACTTGCAGTTCATCTCCAATGCACGAGttcccattttaaaatttaaaagcaacCGGCAGGGTATATCTTGTGACATTTCAATTAATAACCTGCCGGGCCAAATGAAATCCAAGATTTTGCTTTGGATCAACAAGATAGATGGCCGCTTTCATGATATGGTTTTACTGGTCAAGGAATGGGCCAAAGCACATAAAATCAATAACTCTAAAGCTGGAACTTTCAACTCCTATTCCCTTAGTCTACTTGTGATATTTCATTTTCagACATGTGCTCCTGCAATTTTACCACCACTTAATGATATATACCCTGGCAATATGGTTGACGATCTTAGAGGTATTAGAGCTGATGCAGAGAATCTTATTGCAGAAACATGTGATGCTAACATAAACCGGTTCATATCAGACAAGGCAAGGTCAATTAACAGAAAATCTTTGCCTGAACTTTTTGTTGAATTCCTAAGAAAGTTTGCTCAGATGGATTCATGGGCCTCAGAGCTTGGAATTTGCCCTTATAATGGACAATGGGAACAGATAAAGAACAACATGAGATGGTTACCCAAGACTTACTCAATATTTGTTGAGGATCCTTTTGAGCAGCCACAAAATACTGCAAGATCCGTCAGCGCAGGACAACTGAAGAAGATAACTGAGGCGTTTTTAAGGACTTACAGCTTGCTGACCTCGAAAAATCAgaatcaaaattcacttttgACCAACTTAGCTCCTCCACATGTATTAAGATGTCTAACAAAACCTCCTGTCAGATATTACGGTGGAGGTTACTTTCACCCAACTCCACCACAAGTGCAGAAAGCCATACGCCCACGACCGGCATCACACCGTCATTTTCAAAATGCCAGTCAAGGAACAAGCTCTAACAGTTCATCTTCAAAAGGACAGACACAGGTGCATAAAGGCCAGCAGATATGGAGGCCAAAGAGTTAA 1260 0.3825 MSTHSMLDIVLNDILRVVTPSQEDWEIRFAIINDLRSIVESVESLRGATVEPFGSFVSSLFTRWGDLDISIELSNGLHISSAGKKQKQTLLGDLLKALRMTGGGSNLQFISNARVPILKFKSNRQGISCDISINNLPGQMKSKILLWINKIDGRFHDMVLLVKEWAKAHKINNSKAGTFNSYSLSLLVIFHFQTCAPAILPPLNDIYPGNMVDDLRGIRADAENLIAETCDANINRFISDKARSINRKSLPELFVEFLRKFAQMDSWASELGICPYNGQWEQIKNNMRWLPKTYSIFVEDPFEQPQNTARSVSAGQLKKITEAFLRTYSLLTSKNQNQNSLLTNLAPPHVLRCLTKPPVRYYGGGYFHPTPPQVQKAIRPRPASHRHFQNASQGTSSNSSSSKGQTQVHKGQQIWRPKS 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1517 419 MobiDBLite consensus disorder prediction 370 419 - -
Ssu9g1517 419 MobiDBLite consensus disorder prediction 386 419 - -
Ssu9g1517 419 Gene3D Beta Polymerase, domain 2 31 151 IPR043519 -
Ssu9g1517 419 PANTHER PROTEIN HESO1 1 407 - -
Ssu9g1517 419 SUPERFAMILY PAP/OAS1 substrate-binding domain 154 337 - -
Ssu9g1517 419 Gene3D - 152 329 - -
Ssu9g1517 419 SUPERFAMILY Nucleotidyltransferase 6 147 IPR043519 -
Ssu9g1517 419 CDD NT_PAP_TUTase 27 148 - -
Ssu9g1517 419 PANTHER POLY A POLYMERASE CID PAP -RELATED 1 407 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1517 - - ccaj:109788017 714.916