Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1515 ATGACAAGTTTTGAGGATGAGGAATCTGTGATCGAAGAAATGGCAGCTGCAAAGAGCAATGCCCACAAAGCTTCAAGGTGGTCCCTTAACGGAATGACTGCTCTCGTTACCGGTGGAACTCGCGGAATTGGGCATGCCATAGTGGAGGACTTATGTGGGTTTGGTGCCGCTGTCCACACTTGTTCCAGAAACCAAGCTGAGCTTGATAAGTGTTTGACAGAATGGCGTAGTAAGGGGTTTTCGGTTTCTGGATCTGTGTGTGATGTCTCATCTCAACCCCACAGAGAGAAACTCATTCAGGAAGCCACTTCCCTCTTCAATGGCAACCTTAATATTTATGTGAACAATGTTGGAGTAAACTATAGGAAGCCAACCATTGAGTACACTGCTGAAGACTATGCACAAATCATGGCAGTGAATTTAGACTCTGCTTACCATCTGTGCCAACTTGCATATCCTCTTCTAAAAGCATCTGGAATGGGAAGCATTGTGTTCATTTCATCCATTGCTGGCGTGGTCAGCTTAGGTACTGGATCCGTCTATGCAGCATGTAAAGCTGCAATCAATCAGCTTACAAAGTATATGGCTTGTGAATGGGCTAAAGACAACATAAGGAGCAATTGTGTTGTTCCTGCCACTACCAATACACCACTTGTTGAACATCTGCTTCGCAACAAGAAGTATGTAGAAGAAATGTTATCTCGAACTCCTCTTGGGCGCATCGCAGAATCTCAAGAAGTTTCGTCCTTGGTGGCTTTCCTTTGTCTTCCTGCTGCCTCTTACATCACAGGACAGGTTATTTCTGTTGATGGAGGATTAACAGTGAATGGATTTCAACCCAGCATGAGAATAACATGA 858 0.4452 MTSFEDEESVIEEMAAAKSNAHKASRWSLNGMTALVTGGTRGIGHAIVEDLCGFGAAVHTCSRNQAELDKCLTEWRSKGFSVSGSVCDVSSQPHREKLIQEATSLFNGNLNIYVNNVGVNYRKPTIEYTAEDYAQIMAVNLDSAYHLCQLAYPLLKASGMGSIVFISSIAGVVSLGTGSVYAACKAAINQLTKYMACEWAKDNIRSNCVVPATTNTPLVEHLLRNKKYVEEMLSRTPLGRIAESQEVSSLVAFLCLPAASYITGQVISVDGGLTVNGFQPSMRIT 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1515 285 PANTHER TROPINONE REDUCTASE 17 282 IPR045000 GO:0016491
Ssu9g1515 285 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 169 IPR002347 -
Ssu9g1515 285 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 181 200 IPR002347 -
Ssu9g1515 285 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 108 119 IPR002347 -
Ssu9g1515 285 PRINTS Glucose/ribitol dehydrogenase family signature 237 257 IPR002347 -
Ssu9g1515 285 PRINTS Glucose/ribitol dehydrogenase family signature 155 171 IPR002347 -
Ssu9g1515 285 PRINTS Glucose/ribitol dehydrogenase family signature 33 50 IPR002347 -
Ssu9g1515 285 PRINTS Glucose/ribitol dehydrogenase family signature 108 119 IPR002347 -
Ssu9g1515 285 PRINTS Glucose/ribitol dehydrogenase family signature 181 200 IPR002347 -
Ssu9g1515 285 PRINTS Glucose/ribitol dehydrogenase family signature 202 219 IPR002347 -
Ssu9g1515 285 Pfam Enoyl-(Acyl carrier protein) reductase 40 274 - -
Ssu9g1515 285 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 31 276 IPR036291 -
Ssu9g1515 285 Gene3D - 12 278 - -
Ssu9g1515 285 PANTHER NAD(P)-BINDING ROSSMANN-FOLD PROTEIN 17 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1515 Ssu-Chr9 50948929 50954107 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1515 26 280 Miscellaneous Gene Families AT2G29290 61.868 2.90e-116 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1515 K08081 - gmx:100775806 500.36