Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1514 ATGACGGCTCTTGTCACTGGTGGCACCCGCGGGATCGGGCACGCCATAGTGAGTGACTTAGCCGCGTTTGGCGCCGCTGTGCACACTTGTTCCAGGAACCAAACAGAGCTCAATAAGTGCTTACAAGAGTGGCAGAGTCAGGGCCTTCAGGTTACTGGGTCGGTCTGTGACGTGTCCTCACCACCCCAGAGAGAGAAGCTTATTCAGGAAGTGGCATCCACCTTCAATGCTAAGCTTAACATCTATCTAGATTTGGTTCATTTAGTAGACCTGAATAATGTGTGCAAATGCTCCCAATTTGAGATCATCAGCTTCCATCACAAATTAACGATTCTCTTTCAAACTGCAATTAATCAGCTTACAAAAAATCTGGCTTGTGAATGGGCAAATGACAACATAAGGAGCAACTGTGTTGTACCATGGGCAACCAGAACCCCGCTTGTTGAGCATttgCTCCAAAACCACAAGTTTGTGGATGATGTTATGTCTCGGACCCCGCTTAAGCGCATTTCAGAACCTGAAGAAGTGTCATCGTTGGTGACTTTCCTTTCTTTGCCTGCTGCCTCTTACATCACTGGACAAGTTATTTCTGTTGATGGAGGATTAACTTTGTTAACAAACCAGAAGTTTGTGGATGATGTTATGTCTCGGACTCCGATCAAGCGTATAGCAGAACCCGAAGAAGTGTCATCGTTGGTGACTTTCCTTTGCTTGCCTGCTGCCTCTTACATCACCGGACAGGTTATTTGTGTTGATGGAGGAATAACAGTGAATGGATTTCAACCCAGCATGAGAGTTACCTGA 804 0.4602 MTALVTGGTRGIGHAIVSDLAAFGAAVHTCSRNQTELNKCLQEWQSQGLQVTGSVCDVSSPPQREKLIQEVASTFNAKLNIYLDLVHLVDLNNVCKCSQFEIISFHHKLTILFQTAINQLTKNLACEWANDNIRSNCVVPWATRTPLVEHLLQNHKFVDDVMSRTPLKRISEPEEVSSLVTFLSLPAASYITGQVISVDGGLTLLTNQKFVDDVMSRTPIKRIAEPEEVSSLVTFLCLPAASYITGQVICVDGGITVNGFQPSMRVT 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1514 267 PANTHER NAD(P)-BINDING ROSSMANN-FOLD PROTEIN 114 204 - -
Ssu9g1514 267 PANTHER NAD(P)-BINDING ROSSMANN-FOLD PROTEIN 1 91 - -
Ssu9g1514 267 Gene3D - 207 261 - -
Ssu9g1514 267 PANTHER TROPINONE REDUCTASE 1 91 IPR045000 GO:0016491
Ssu9g1514 267 Pfam Enoyl-(Acyl carrier protein) reductase 207 256 - -
Ssu9g1514 267 Pfam Enoyl-(Acyl carrier protein) reductase 115 203 - -
Ssu9g1514 267 Gene3D - 113 206 - -
Ssu9g1514 267 PRINTS Glucose/ribitol dehydrogenase family signature 2 19 IPR002347 -
Ssu9g1514 267 PRINTS Glucose/ribitol dehydrogenase family signature 166 186 IPR002347 -
Ssu9g1514 267 PRINTS Glucose/ribitol dehydrogenase family signature 131 148 IPR002347 -
Ssu9g1514 267 PRINTS Glucose/ribitol dehydrogenase family signature 110 129 IPR002347 -
Ssu9g1514 267 PANTHER TROPINONE REDUCTASE 114 204 IPR045000 GO:0016491
Ssu9g1514 267 Gene3D - 1 98 - -
Ssu9g1514 267 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 2 204 IPR036291 -
Ssu9g1514 267 PANTHER TROPINONE REDUCTASE 204 264 IPR045000 GO:0016491
Ssu9g1514 267 PANTHER NAD(P)-BINDING ROSSMANN-FOLD PROTEIN 204 264 - -
Ssu9g1514 267 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 207 257 IPR036291 -
Ssu9g1514 267 Pfam short chain dehydrogenase 2 79 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1514 Ssu-Chr9 50917403 50936705 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1514 1 204 Miscellaneous Gene Families AT2G29290 44.672 1.79e-63 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1514 K08081 - gmx:100791265 302.367