Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1509 atgggACGTTTGAAGCTGCAAGCTGGGATCAATGCAATAGAGGAGGAGGAACCTGAGGAATGTGATTCTGCCTATCCTAACAAAACAACTTTGGCATGCATGATCAATTCAGAAATTGGTGCTGTTTTGGCGGTCATGAGAAGAAATGTTAGATGGGGAGGCCGTTATATGTCAGGCGATGATCAGCTGGATAACTCTCTCATTCAGTCTTTCAAGACAGTAAGGAGACAAATCTTTTTGTGGCACCACCATCAGTGGCAAGCTATCAACCCTGCCTTGTATCTACAGCCATTTTTAGATGTAATTAGGTCTGATGAAACTGGTGCCCCAATTACTGGTGTTGCTTTGTCATCTGTTTACAAGATCTTGACTCTTGATGTGATTGATCAAAATACTGTCAATGTTGAGGATGCCATGCACTTGGTGGTTGATGCTGTCACTAGTTGCAGATTTGAGGTCACTGATCCTTCTTCAGAAGAAGTTGTTTTAATGAAGATACTACAAGTTCTCCTAGCTTGTATGAAAAGTAAAGCATCTATAATGCTGAGTAACCAACATGTTTGCACCATAGTGAATACTTGTTTCCGAATAGTTCATCAAGCAGGAACTAAAGGTGAATTGTTGCAGCAGATAGCACGGTACACAATGCATGAACTTGTTAGGTGTATTTTCTCTCATCTTCAACATGTTGGCAACACAGACCATGCATTGGTTAATGGGAGCTCTAATTTGAAACAGGAGATCAGAGGCCTAGATAATGAGTATGCATTTGGAAGTAGACAGTTGGAGAATGGCAGCATGAGTTCTGAATACGATAATCAGTCATTATCCTCAAACTCTGCTCCCAATGCTGCAAGTGTTGTGAAAGCAACTGTGATGGAGGAAAACACAGCGATAACTATTAGTGGCAAGGAGGGTGTACCCTATGACATGCATCTCATGACTGAACCATATGGTGTTCCTTGCATGGTGGaaatatttcactttttgtgTTCTTTGCTGAATGTTGTCGAGCATACGGGAATGGGTCCTAGATCAAACACACTAGCATTTGATGAAGATGTGCCTCTCTTTGccttaactttaattaattcagCAATAGAACTTGGAGGACCTTCTATTTGTCGTCACCCAAGGTTGCTGAGCTTAATTCAGGATGAATTGTTTCATAATCTGATGCAATTTGGTTTGTCAATGAGTCCCCTTATACTTTCGATGGTGTGTGGCATTGTTCTCAATCTGTATCATCATCTTCGTACAGAACTCAAATTACAGCTAGAAGCATTTTTTTCTTGTGTCATTTTGAGACTTGCACAAAGCAGATATGGAGCTTCATACCAGCAGCAAGAGGTAGCCATGGAGGCCCTTGTTGACTTCTGCAGGCAAAAGACATTTATGGTAGATATGTATGCTAACTTTGACTGTGACATAACTTGCAGTAATGTCTTTGAAGACCTTGCTAATTTGTTGTCTAAAAGTGCATTTCCTGTGAATTGTCCATTGTCTGCCATGCATATTCTTGCTTTGGATGGTCTTATAGCTGTTATACAGGGAATGGCCGAAAGGATAGCCAATGGATCTGTAAGCTCAGAATATTCTCCAGTGAATCTTGAAGAGTATACTCCATTCTGGATGGTTAAATGTGAGAATTATAATGATCCAAATCATTGGGTTCCTTTTGTCCGCCGAAGAAAATACATAAAGAGAAGATTGATGATTGGTGCTGACCACTTTAATCGTGATCCTAAGAAAGGTCTAGAGTTTCTCCAGGGAACGCATCTTTTGCCTGACAAACTTGATCCCCAAAGTGTTGCCTGCTTTTTCAGATACACTGCAGGGTTGGATAAGAATCTTGTTGGTGATTTCCTAGGAAATCATGATGAATTCTGTGTTCAGGTTCTTCAGGAATTTGCTGGAACATTTGATTTCCAAGACATGAACTTAGACACAGCTCTGCGTCTATTCTTGGAGACTTTCAGACTGCCTGGAGAATCGCAAAAAATACATAGGGTGCTTGAAGCTTTCTCTGAGAGATATTATGAACAATCACCACATATCCTAGCTAACAAGGATGCTGCTCTTGTGTTATCATACTCAATGATAATGCTTAATACAGATCAGCACAATGTGCAAGTTAAAAAGAAGATGACAGAAGAGGATTTTATCAGGAATAATAGGCATATAAATGGTGGCAATGATCTTCCTCGAGAAATGCTGTCAGAGATTTACCATTCAATTTGTAAGAATGAGATCCGCACAACCCCTGAACAAGGTGTTGGGTTTCCTGAAATGACACCAAGTCGTTGGATTGATCTAATGCATAAGTCAAAAAAAACTGCTCCATTTATTATATCTGATTCTAAGGCCTACCTTGATCATGATATGTTTGCCATAATGTCAGGCCCAACAATTGCTGCCATCTCTGTGGTATTTGATCATGCTGAACAGGAAGAGGTATACCAAACATGTATGGATGGATTCTTAGCTATTGCTAAAATTTCAGCTTGCCATCATCTTGAAGATGTTCTTGATGATCTGGTAGTGTCTCTTTGTAAGTTCACTACACTTTTAAACCCGTCATCAGTTGAGGAACCAGTCCTTGCCTTTGGAGATGACATGAAAGCAAGAATGGCAACGGTGACAGTATTCACTATAGCAAACAGGTATGGTGATTACATACGCACAGGTTGGAGAAATATTCTTGATTGCATATTAAGACTGCACAAGCTTGGTCTTCTTCCTGCCCGGGTTGCCAGTGATGCAGCTGACGAGTCAGATCTTTCTGCTGAAACTGTGCATGGAAAGCCTATTATGAATTCGTTATCCTCAGCTCACATGCAATCTATTGGCACTCCAAGGAGATCCTCAGGATTGATGGGTAGGTTTAGTCAACTCTTATCCCTTGACACCGAGGAACCAAGATCACAACCTACTGAACAACAACTTGCTGCTCATCAGCGCACCCTACAAACCATACAGAAATGTCATATTGACAGCATATTCACTGAGAGTAAATTTCTCCAAGCTGAATCTCTACTGCAGCTAGCAAGAGCACTCATTTGGGCTGCTGGGAGACCTCAAAAAGGGAACAGCACACCTGAGGATGAAGATACAGCAGTTTTCTGCCTGGAGTTGCTGATTGCAATCACTTTGAATAACAGGGATAGAATTGGGATTCTTTGGCAGGGTGTGTACGAACACATATCCAATATTGTTCAGTCAACTGTAATGCCCTGTGCCCTGGTAGAGAAGGCTGTTTTTGGACTACTGCGAATTTGTCAGCGGTTGCTTCCCTACAAGGAGAACATTGCTGATGAACTTCTGAGGTCATTGCAACTTGTCTTGAAGCTTGATGCCCGGGTTGCAGATGCATACTGTGAGCAGATTACTCAGGAAGTCAGTCGCCTTGTGAAGGCAAATGCTTCTCATATAAGATCTCAGTTAGGATGGCGTACAATTACATCACTACTTTCCATCACAGCTAGACACATAGAAGCATCTGAGGCTGGGTTTGATGCACTATTGTTTATAATGTCTGATGGTGCCCACTTACTTCCAGCTAATTATGTTCTCTGTGTAGATACTGCCAGGCAGTTTGCTGAATCTCGAGTAGGACAAGCAGAGCGATCTGTGCGTGCGCTAGATCTCATGGCAGGGTCTGTCAATTGCTTGGCCCGGTGGACTAGTGAGGCTAAGGAAGCAATGGAGGAGGAGCAAGTGTCTAAGTTGTCTCAGGATATTGGAGAGATGTGGTTGAGACTAGTACAAGGTCTAAGGAAGGTATGTTTAGACCAGAGAGAGGAGGTTAGAAACCATGCTTTATTATCTTTGCAGAAGTGCTTGACGGGAGCTGATGGCATTTATCTCCCGTATAGCTTGTGGTTACAATGTTTTGATCTGGTGATCTTCACTGTGCTTGATGACCTGCTTGAGATTGCACAGGGACACTCTCAGAAGGACTACCGCAACATGGAAGGCACACTTATCTTAGCAATGAAGCTCTTGTCCaaagtttttcttcaattacTCCCAGATTTATCACAATTGACAACCTTCTGCAAGCTATGGTTAGGGTGTACTGAGCAGAATGGAAAAATATATGAAGGTGAAGGTTAG 4116 0.414 MGRLKLQAGINAIEEEEPEECDSAYPNKTTLACMINSEIGAVLAVMRRNVRWGGRYMSGDDQLDNSLIQSFKTVRRQIFLWHHHQWQAINPALYLQPFLDVIRSDETGAPITGVALSSVYKILTLDVIDQNTVNVEDAMHLVVDAVTSCRFEVTDPSSEEVVLMKILQVLLACMKSKASIMLSNQHVCTIVNTCFRIVHQAGTKGELLQQIARYTMHELVRCIFSHLQHVGNTDHALVNGSSNLKQEIRGLDNEYAFGSRQLENGSMSSEYDNQSLSSNSAPNAASVVKATVMEENTAITISGKEGVPYDMHLMTEPYGVPCMVEIFHFLCSLLNVVEHTGMGPRSNTLAFDEDVPLFALTLINSAIELGGPSICRHPRLLSLIQDELFHNLMQFGLSMSPLILSMVCGIVLNLYHHLRTELKLQLEAFFSCVILRLAQSRYGASYQQQEVAMEALVDFCRQKTFMVDMYANFDCDITCSNVFEDLANLLSKSAFPVNCPLSAMHILALDGLIAVIQGMAERIANGSVSSEYSPVNLEEYTPFWMVKCENYNDPNHWVPFVRRRKYIKRRLMIGADHFNRDPKKGLEFLQGTHLLPDKLDPQSVACFFRYTAGLDKNLVGDFLGNHDEFCVQVLQEFAGTFDFQDMNLDTALRLFLETFRLPGESQKIHRVLEAFSERYYEQSPHILANKDAALVLSYSMIMLNTDQHNVQVKKKMTEEDFIRNNRHINGGNDLPREMLSEIYHSICKNEIRTTPEQGVGFPEMTPSRWIDLMHKSKKTAPFIISDSKAYLDHDMFAIMSGPTIAAISVVFDHAEQEEVYQTCMDGFLAIAKISACHHLEDVLDDLVVSLCKFTTLLNPSSVEEPVLAFGDDMKARMATVTVFTIANRYGDYIRTGWRNILDCILRLHKLGLLPARVASDAADESDLSAETVHGKPIMNSLSSAHMQSIGTPRRSSGLMGRFSQLLSLDTEEPRSQPTEQQLAAHQRTLQTIQKCHIDSIFTESKFLQAESLLQLARALIWAAGRPQKGNSTPEDEDTAVFCLELLIAITLNNRDRIGILWQGVYEHISNIVQSTVMPCALVEKAVFGLLRICQRLLPYKENIADELLRSLQLVLKLDARVADAYCEQITQEVSRLVKANASHIRSQLGWRTITSLLSITARHIEASEAGFDALLFIMSDGAHLLPANYVLCVDTARQFAESRVGQAERSVRALDLMAGSVNCLARWTSEAKEAMEEEQVSKLSQDIGEMWLRLVQGLRKVCLDQREEVRNHALLSLQKCLTGADGIYLPYSLWLQCFDLVIFTVLDDLLEIAQGHSQKDYRNMEGTLILAMKLLSKVFLQLLPDLSQLTTFCKLWLGCTEQNGKIYEGEG 1371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1509 1371 ProSiteProfiles SEC7 domain profile. 560 749 IPR000904 GO:0005085|GO:0032012
Ssu9g1509 1371 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 11 1362 - -
Ssu9g1509 1371 Gene3D - 644 760 IPR023394 -
Ssu9g1509 1371 SUPERFAMILY ARM repeat 347 1301 IPR016024 -
Ssu9g1509 1371 PANTHER ARF GUANINE-NUCLEOTIDE EXCHANGE FACTOR GNOM-LIKE 11 1362 - -
Ssu9g1509 1371 Pfam Guanine nucleotide exchange factor in Golgi transport N-terminal 321 482 IPR032691 -
Ssu9g1509 1371 Gene3D - 561 643 - -
Ssu9g1509 1371 Pfam Sec7 domain 568 751 IPR000904 GO:0005085|GO:0032012
Ssu9g1509 1371 CDD Sec7 568 751 IPR000904 GO:0005085|GO:0032012
Ssu9g1509 1371 SMART sec7_5 564 751 IPR000904 GO:0005085|GO:0032012
Ssu9g1509 1371 SUPERFAMILY Sec7 domain 565 754 IPR035999 GO:0005085|GO:0032012
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1509 Ssu-Chr9 50870399 50875162 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1509 K18443 - gmx:100789153 2605.09