Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1506 ATGGAGAAGAAGATGAATCACACTCGCTTGGAACCTTGTCATGAACCTCCTCTTAAAGCATCCAGATCCTCTTTTTTCCCAGAAAAACTTGGTGATATGGTTACACTCTTAATAAGGATTGGCGTACTAATGTGCCTTGTTGCATCCATATCACTTGTTCTCCACTCCGCATTCTCTAAACCAGACCGGCGGTTCCCATTACCGGAGCATTTACACGCCGTCCAGAATGCTTCAGTAATCATTGACAGTGGACCCACAAACATCTCACATATTCAATTTGGCATTGCTGGTTCAGCAAACACATGGCATGACCGTAGCAACTACAGTAAGCTATGGTGGAATCCAAACACCACAAGAGGTTTTGTTTGGCTTGACAAGAAGCCCAAGATTTTACACACTGACATGTTAGTGCCATATCAAATCTCACAGGGCTGGACTCGGTTCAAGTATGTGCACTCAGCATCTGCAGTTCGGATAGCTCGGATAGTTTATGAGAGCTTTAAGCTTAGTTTGCCAAATGTTAGGTGGTTTGTGATGGGAGATGATGATACTGTGTTTTTTACTGAGAACTTAGTTACTGTGTTGGGAAAATATGATCACAATCAAATGTATTACATTGGTGGGAATTCTGAGAGTGTAGAGCAAGATGTGATGCATTCTTATAATATGGCATTTGGTGGTGGTGGATTTGCAATCAGTTATGCATTAGCAGCTCAACTAGCCAGAATAATGGATGGTTGTCTAAGTAGATACTTCTATTTTTATGGTTCTGATCAAAGGGTCTGGGCCTGTGTGCATGAAATTGGGGTGCCTCTTACCAAAGAAGGTGGATTCCACCAGCTTGACATAAGAGGGAATCCATATGGTCTTCTAGCAGCACACGCCTTGGTACCACTTGTATCACTCCATCACCTTGACCAATTGAACTCCTTGTTTCCCGACCAGACTCAAATACATTCAATGAAAAAGCTCATCAGTGCATACCACATTGACCCTGCCCGGATAGTGCAACAAAGCTTTTGCTATGATCATAAGCGTAGATGGTCAATATCTATTTCTTGGGGTTACACCATACAAATCTATACAACACTGTTGATAGCAGCGGATTTGCAGATGCCATTGCAGACATTTCAGACTTGGCGAAGTTCAAGGGATGGTCCCTTCACATTTAATACTAGACGTATGAGCTCTGACCCATGCCAGCAGCCAGCTATATTTTTCCTGGACCAGGTTACAAAGGTGGGAAGAAGTGGAAGTATCACTACCTACAAGAGACATGAAGGCAAGGAAACAAAGTGCAAGAGAGAAGGCATTAATAATGTGGAAGTGCAAAGAATTAGAGTTTCTGCCTTGAAGCTGGATCCAGAATATTGGAAGAATGTACCGCGTAGGCATTGCTGCAAACTTATGGATGGTGGAAGCATAAAGAATGGCACTATGCATATCAGGATTAGGAAATGCAGACCTCAAGAAACAATTACTATTTAG 1488 0.4247 MEKKMNHTRLEPCHEPPLKASRSSFFPEKLGDMVTLLIRIGVLMCLVASISLVLHSAFSKPDRRFPLPEHLHAVQNASVIIDSGPTNISHIQFGIAGSANTWHDRSNYSKLWWNPNTTRGFVWLDKKPKILHTDMLVPYQISQGWTRFKYVHSASAVRIARIVYESFKLSLPNVRWFVMGDDDTVFFTENLVTVLGKYDHNQMYYIGGNSESVEQDVMHSYNMAFGGGGFAISYALAAQLARIMDGCLSRYFYFYGSDQRVWACVHEIGVPLTKEGGFHQLDIRGNPYGLLAAHALVPLVSLHHLDQLNSLFPDQTQIHSMKKLISAYHIDPARIVQQSFCYDHKRRWSISISWGYTIQIYTTLLIAADLQMPLQTFQTWRSSRDGPFTFNTRRMSSDPCQQPAIFFLDQVTKVGRSGSITTYKRHEGKETKCKREGINNVEVQRIRVSALKLDPEYWKNVPRRHCCKLMDGGSIKNGTMHIRIRKCRPQETITI 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1506 495 PANTHER FRINGE-RELATED 14 493 - -
Ssu9g1506 495 PANTHER BNAA05G27650D PROTEIN 14 493 - -
Ssu9g1506 495 Gene3D - 82 344 - -
Ssu9g1506 495 Pfam Protein of unknown function, DUF604 215 467 IPR006740 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1506 Ssu-Chr9 50864667 50866934 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1506 4 493 Glycosyltransferase AT3G11420 56.436 0.0 548
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1506 - - gmx:100802549 894.804