Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1501 ATGGCGGCTGTCACGGAATTTGGGGTGTCTCAATTCTTGCAGGGTACCTCCAGGCAAACTTTGTTTTTGAAGAAGCAGCCTCAGAGACAGAGAAGTCACATGCTTTGGGGTAACCTTTGGAATAGGAATTGGGTTCTGGGATCAACTCGAAGAGCTTTGCCTTTAAGGTGCCAGGCTCAAGAAAATCCCAGAGCTATGGTTTCTGGTGGTGTGAGCAGTTCAGTAGAGGAGCAACCTGGCTTGGTTGAGAAGCCTGCTGTGgaagtttttcatttatttcgtGTCCCGTTTATGCAAGAAAGTGCAGCTGCTGAGCTTCTAAAGGAAGCTCAAGCGAAAATCTCTAATCAGATTGTGGAAATACAAACGGAGCAATGCTACAATATTGGCCTTGGTTCACAACTTTCAAGTGGAAAGCTTTCAGTCCTTAAATGGCTTCTTCAAGAAACATTTGAGCCAGAGAATCTGGGAACTGAGAGCTTTCTtgagaagaagaggaaggagGGTTTGAGTCCAGTTATAATTGAGGTTGGCCCCAGGTTGTCATTTACCACAGCATGGTCTACTAATGCTGTGGCAATTTGCCAAGCCTGTGGTTTGACAGAAGTGAACCGTTTGGAACGGTCAAGGAGGTACTTGTTGTTCACCACCAGTGAACTGCGAGATTATCAAATCAATGAATTTGCATCTATGGTGCATGATAGGATGACTGAATGTGTTTATACTCAGAAGCTAACATCCTTTGAGACCAGTGTAGTTCCAGAGGAAATTCGTTATATACCTGTCATGGAGAGGGGACAAAAGGCATTAGAAGAGATTAATCTGGAGATGGGTTTTGCCTTTGATGACCAGGATTTGGAATACTACACCAAACTTTTCAGAGAAGACATTAAGCGCAATCCAACAAATGTGGAATTGTTTGATATTGCGCAGTCCAACAGTGAGCATAGTAGACACTGGTTTTTTACTGGAAAGATTTTCATTGATGGACAGCTTATGAGTAGAACTCTTATGCAAATTGTGAAGAGTACTTTACAGGCAAATCCAAATAACTCAGTTATTGGCTTTAAGGATAACTCAAGTGCAATCAAGGGTTTCCCTGTAAAGCAGCTCCGACCAGTTCAGCCTGGTTTAGCATGTCCACTAGACGTTGCAGCGCATGAGTTAGATGTCTTGTTTACAGCTGAAACACATAATTTTCCATGTGCAGTGGCACCTTATCCTGGTGCAGAGACAGGTGCAGGAGGTCGCATTAGGGATACACATGCTACAGGAAGGGGGTCCTTTGTCCAGGCAGCTACAGCTGGTTATTGTGTTGGGAATCTCAACACGCCAGGCTTTTATGCTCCATGGGAAGATCCCTCCTTTAGTTATCCATCGAATTTGGCATCACCTTTACAGATTCTTATAGATTCTAGTAATGGTGCATCTGACTATGGGAACAAATTTGGAGAGCCATTGATCCAGGGTTTCTGTAGAACTTTTGGAATGAGACTTCCTAGTGGGGAGAGGCGGGAATGGTTGAAGCCAATCATGTTCAGTGCAGGCATTGGACAGATTGACCACCTTCATATATCAAAAGGAGAGCCTGACATTGGAATGCTGGTTGTTAAGATTGGAGGCCCGGCTTATCGTATTGGTATGGGAGGTGGGGCAGCCTCGAGCATGGTCAGTGGGCAGAATGATGCAGAGCTTGATTTCAATGCTGTGCAACGTGGGGATGCTGAGATGGCTCAAAAACTATATCGTCTTGTTCGTGCCTGTATTGAGATGGGGAAGAAAAATCCAATTATCAGCATTCATGATCAGGGTGCTGGCGGGAACTGCAATGTTGTAAAGGAAATTATATATCCGAAGGGTGCCGAGATAGATGTCCGAGCAATTGTGGTTGGTGATCATACAATGTCTGTTCTAGAAATTTGGGGTGCAGAGTATCAGGAGCAGGATGCAATCTTGGTGAAGCCTGAAAGTCATGATCTCTTAAAATCAATCTGTAACAGGGAAAAAGTTTCAATGGCTGTTATTGGAACTATTAGTGGTGATGGACGTGTTGTGTTAGTTGATAGCTTAGCAACTCGGAACTGTATTTCAAATGGACTCCCTCCGCCTCCCCCTGCAGTGGATCTTGAACTGGAGAAAGTCCTTGGTGACATGCCaaagaaaacttttaaatttaatcggGTTGTTTATGAGCGGGAGCCACTTGATATTGCCCCTGGGGTTGCAGTGATAGATTCTCTGAAGAGGGTATTGAGTTTACCGTCTGTTTGTTCAAAACGCTTCTTAACAACAAAAGTTGATAGGTGTGTTACTGGTCTAGTGGCACAGCAGCAAACTGTTGGCCCTTTGCAGATTCCCCTTGCTGACGTTGCTGTTACAGCTCAAACTTTTGCTGATGTAACTGGAGGTGCTTGTGCCATTGGGGAACAACCCATCAAAGGCTTGTTAAACCCCAAAGCAATGGCTCGGTTGGCTGTTGGAGAAGCACTAACAAATCTTGTATGGGCAAAGGTCACTTCCCTTTCTGATGTCAAGGCTAGTGGTAATTGGATGTATGCTGCCAAGCTTGATGGGGAAGGAGCTGACATGTATGATGCTGCTATATCTTTATCTGAAGCAATGGTTGAACTTGGCATTGCTATTGATGGAGGGAAAGACAGCCTTTCTATGGCAGCCCATGCTGAAAGCGAAGTTGTCAAGGCTCCAGGAAATCTTGTCATCAGTGTTTATGTTACTTGTCCTGATATAACAAAAACAGTGACACCAGATTTAAAACTTAAGGATGATAGTATTTTGCTTCATATTGATTTGGCAAAAGGTAAGAGGCGGTTAGGTGGATCTGCTCTTGCCCAGGCGTTTGACCAAGTTGGGGATGAGTGTCCTGATCTTGATGATGTTCCTTACCTCAAAAAAGTCTTTGAAGGTGTTCAAGACCTTCTTACTGATGAACTGATCTCTGCTGGTCATGACATCAGTGATGGTGGGCTGCTAGTTTGTGCCTTAGAGATGGCATTTGCTGGTAATTGCGGACTTAGGTTGGACTTGACATCGCAAGGTAACGGCCTTTTCCAAACACTCTATGCTGAAGAGCTTGGGCTAGTTCTTGAGGTAAGCCAGAACAATCTGGCCTTGGTAATGGATAAATTGAACAATGTGGGAGTTTCAGCTGAAATCATAGGTCAAGTAACTGCCAATCCATCAATCGAAGTTAAGGTTGATGGGATGACTTGTTTAACTGAAAAAACTAGTATCCTTAGGGACATGTGGGAAGAGACCAGTTTTCGGCTGGAAAAGTTCCAAAGATTGGCATCTTGTGTGGATATGGAGAGAGAAGGACTAAAACATCGATATGAGCCATCATGGGAACTGTCGTTTACTCCTTCCTTCACTGATGAAAAGCTTTTGTCTGCAACTTTAAAACCTAAAGTGGCTGTGATTAGAGAAGAAGGGAGCAATGGAGACAGAGAAATGGCTGCAGCATTTTATGCCGCTGGTTTTGAACCATGGGATGTTACTATGTCAGACCTTCTTAATGGAAAGATCTCTTTGCAAGAGTTCCGTGGAATTGTGTTTGTTGGTGGATTTAGCTATGCTGATGTGCTTGATTCTGCAAAAGGTTGGTCCGCTTGCATAAGATTTAATGAGCCCGTTCTACAACAGTTTCAGGAGTTTTACAAGCGTCCAGACACTTTCAGTTTAGGGGTATGCAATGGATGTCAGCTAATGGCTTTGTTGGGATGGGTACCAGGCCCACAAGTTGGGGGTGTGCATGGTGCTGGTGGCGACCTATCACAACCGAGGTTCATTCATAATGAGTCAGGGCGGTTTGAATGCCGCTTTACAAGTGTGACCATAAAGGACTCACCGGCTATAATGTTCAAAGACATGGCGGGTAGCACATTGGGTATATGGGCTGCTCATGGTGAGGGAAGAGCTTATTTCCCGGATGAAGGTGTGTTGGACCGTATAGTTCATTCTGAGTTAGCTCCTATAAGATATTGCGATGATGCTGGGAATCCAACAGAGGCCTACCCTTTCAATGTGAATGGCTCTCCTTTAGGGGTAGCTGCTATTTGTTCTCCAGATGGGAGGCATCTTGCCATGATGCCTCATCCAGAGCGTTGCTTCTTAATGTGGCAGTTCCCATGGTATCCAAAGCAGTGGGATGTGGACAAGAAGGGGCCTAGTCCTTGGTTGCGCATGTTCCAGAATGCAAGAGAGTGGTTACTCAACAACACACAGCAAGATTGCAGTCACAAGTTTAAAGGACTTATATTTTCTACATTCGGTAAAACTCACCGTAAGATATTTAACTTTTGA 4320 0.4389 MAAVTEFGVSQFLQGTSRQTLFLKKQPQRQRSHMLWGNLWNRNWVLGSTRRALPLRCQAQENPRAMVSGGVSSSVEEQPGLVEKPAVEVFHLFRVPFMQESAAAELLKEAQAKISNQIVEIQTEQCYNIGLGSQLSSGKLSVLKWLLQETFEPENLGTESFLEKKRKEGLSPVIIEVGPRLSFTTAWSTNAVAICQACGLTEVNRLERSRRYLLFTTSELRDYQINEFASMVHDRMTECVYTQKLTSFETSVVPEEIRYIPVMERGQKALEEINLEMGFAFDDQDLEYYTKLFREDIKRNPTNVELFDIAQSNSEHSRHWFFTGKIFIDGQLMSRTLMQIVKSTLQANPNNSVIGFKDNSSAIKGFPVKQLRPVQPGLACPLDVAAHELDVLFTAETHNFPCAVAPYPGAETGAGGRIRDTHATGRGSFVQAATAGYCVGNLNTPGFYAPWEDPSFSYPSNLASPLQILIDSSNGASDYGNKFGEPLIQGFCRTFGMRLPSGERREWLKPIMFSAGIGQIDHLHISKGEPDIGMLVVKIGGPAYRIGMGGGAASSMVSGQNDAELDFNAVQRGDAEMAQKLYRLVRACIEMGKKNPIISIHDQGAGGNCNVVKEIIYPKGAEIDVRAIVVGDHTMSVLEIWGAEYQEQDAILVKPESHDLLKSICNREKVSMAVIGTISGDGRVVLVDSLATRNCISNGLPPPPPAVDLELEKVLGDMPKKTFKFNRVVYEREPLDIAPGVAVIDSLKRVLSLPSVCSKRFLTTKVDRCVTGLVAQQQTVGPLQIPLADVAVTAQTFADVTGGACAIGEQPIKGLLNPKAMARLAVGEALTNLVWAKVTSLSDVKASGNWMYAAKLDGEGADMYDAAISLSEAMVELGIAIDGGKDSLSMAAHAESEVVKAPGNLVISVYVTCPDITKTVTPDLKLKDDSILLHIDLAKGKRRLGGSALAQAFDQVGDECPDLDDVPYLKKVFEGVQDLLTDELISAGHDISDGGLLVCALEMAFAGNCGLRLDLTSQGNGLFQTLYAEELGLVLEVSQNNLALVMDKLNNVGVSAEIIGQVTANPSIEVKVDGMTCLTEKTSILRDMWEETSFRLEKFQRLASCVDMEREGLKHRYEPSWELSFTPSFTDEKLLSATLKPKVAVIREEGSNGDREMAAAFYAAGFEPWDVTMSDLLNGKISLQEFRGIVFVGGFSYADVLDSAKGWSACIRFNEPVLQQFQEFYKRPDTFSLGVCNGCQLMALLGWVPGPQVGGVHGAGGDLSQPRFIHNESGRFECRFTSVTIKDSPAIMFKDMAGSTLGIWAAHGEGRAYFPDEGVLDRIVHSELAPIRYCDDAGNPTEAYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQFPWYPKQWDVDKKGPSPWLRMFQNAREWLLNNTQQDCSHKFKGLIFSTFGKTHRKIFNF 1439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1501 1439 PANTHER PHOSPHORIBOSYLFORMYLGLYCINAMIDINE SYNTHASE 57 1408 - -
Ssu9g1501 1439 SMART GATase_5_2 1140 1409 - -
Ssu9g1501 1439 CDD GATase1_FGAR_AT 1143 1406 - -
Ssu9g1501 1439 PANTHER - 57 1408 - -
Ssu9g1501 1439 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 1142 1386 - -
Ssu9g1501 1439 Gene3D - 1086 1409 IPR029062 -
Ssu9g1501 1439 SUPERFAMILY PurM N-terminal domain-like 743 921 IPR036921 -
Ssu9g1501 1439 Gene3D - 314 519 IPR036921 -
Ssu9g1501 1439 TIGRFAM FGAM_synt: phosphoribosylformylglycinamidine synthase 93 1409 IPR010073 GO:0004642|GO:0006189
Ssu9g1501 1439 Hamap Phosphoribosylformylglycinamidine synthase [purL]. 89 1410 IPR010073 GO:0004642|GO:0006189
Ssu9g1501 1439 CDD PurL_repeat2 789 1062 - -
Ssu9g1501 1439 Gene3D - 730 913 IPR036921 -
Ssu9g1501 1439 Pfam CobB/CobQ-like glutamine amidotransferase domain 1140 1409 - -
Ssu9g1501 1439 Pfam Formylglycinamide ribonucleotide amidotransferase N-terminal 126 244 IPR040707 -
Ssu9g1501 1439 SUPERFAMILY PurM N-terminal domain-like 321 528 IPR036921 -
Ssu9g1501 1439 SUPERFAMILY PurM C-terminal domain-like 530 764 IPR036676 -
Ssu9g1501 1439 SUPERFAMILY PurS-like 91 248 IPR036604 -
Ssu9g1501 1439 Pfam Formylglycinamide ribonucleotide amidotransferase linker domain 270 319 IPR041609 -
Ssu9g1501 1439 Gene3D - 914 1085 IPR036676 -
Ssu9g1501 1439 Gene3D - 520 693 IPR036676 -
Ssu9g1501 1439 Pfam AIR synthase related protein, C-terminal domain 533 686 IPR010918 -
Ssu9g1501 1439 Pfam AIR synthase related protein, C-terminal domain 943 1072 IPR010918 -
Ssu9g1501 1439 Gene3D Phosphoribosylformylglycinamidine synthase, linker domain 253 313 - -
Ssu9g1501 1439 CDD PurL_repeat1 305 688 - -
Ssu9g1501 1439 SUPERFAMILY FGAM synthase PurL, linker domain 253 320 - -
Ssu9g1501 1439 SUPERFAMILY Class I glutamine amidotransferase-like 1138 1409 IPR029062 -
Ssu9g1501 1439 SUPERFAMILY PurM C-terminal domain-like 927 1123 IPR036676 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1501 Ssu-Chr9 50760223 50765081 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1501 K01952 - gmx:100818572 2633.21