Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1500 ATGGCTGCCTCCGTCTCCACTGTCGGAGCTGTCAACAGAACTCTTTTGAACCTGAATGGGTCTGGAGCTGGAGCTTCAGCTCCCAGTTCAGCCTTCTTTGGCACCAACTTGAAGAAGGTTATTGCCTCAAGGGTCCCTAACACCAAGGTTTCCTCTGGAAGCTTCAAAATTGTTGCTGCAGAGAAAGAGATTGATGAGGAGCAGCAGACCGAAAAGGACAGATGGAAGGGTCTGGCCTACGATGTTTCAGATGACCAGCAAGACATCACAAGGGGGAAGGGTATGGTTGATTCCCTTTTCCAAGCTCCAATGGACACTGGAACTCACTATGCAGTCATGAGCTCCTACGAGTACCTTAGCACTGGACTTCGCCAGTACAACTTGGACAACAACGTGGATGGATTTTACATTGCTCCCGCTTTTATGGACAAGCTTGTTGTTCACATCACCAAGAACTTCATGACCCTGCCCAACATCAAGGTTCCTCTCATTCTTGGTATATGGGGAGGCAAAGGACAAGGAAAATCTTTCCAATGCGAGCTTGTCTTTGCCAAGATGGGAATCAACCCCATCATGATGAGTGCTGGAGAGTTGGAAAGTGGAAATGCAGGAGAGCCAGCAAAATTGATTAGGCAGAGATACCGTGAAGCCGCAGACATAATCAGGAAGGGAAAGATGTGCGCTCTCTTCATCAATGATCTTGATGCAGGAGCTGGTCGTCTAGGTGGAACTACCCAATACACTGTCAACAACCAGATGGTGAATGCCACCCTCATGAACATTGCTGATAACCCCACAAATGTGCAGCTTCCTGGTATGTACAACAAGGAAGAGAACCCCCGTGTGCCCATCATTGTCACTGGTAACGATTTCTCAACATTGTATGCTCCCCTCATCCGTGATGGGCGTATGGAGAAGTTCTACTGGGCACCAACTAGGGAAGACCGCATTGGTGTTTGCATGGGAATTTTCCGCACTGATGGTATTCCTGAGCAGGACATTGTCAAGCTTGTTGACACCTTCCCTGGCCAATCCATTGATTTCTTTGGTGCACTCAGGGCCAGAGTATATGATGATGAAGTGAGGAAGTGGGTTTCTGGTGTTGGTGTTGACACCATTGGGAAGAAGCTTGTGAACTCAAAAGAAGGACCTCCTACCTTTGAGCAGCCCAAGATGAGTCTGGACAAGCTCTTGCTGTATGGTAACATGCTTGTCCAAGAACAAGAGAATGTGAAGAGAGTCCAGTTGGCTGACAAGTACTTGAACGAGGCTGCTCTTGGTAATGCTAACGAAGATGCTATTCAGAGGGGAACATTCTTCAGTTCGACTTAA 1332 0.4782 MAASVSTVGAVNRTLLNLNGSGAGASAPSSAFFGTNLKKVIASRVPNTKVSSGSFKIVAAEKEIDEEQQTEKDRWKGLAYDVSDDQQDITRGKGMVDSLFQAPMDTGTHYAVMSSYEYLSTGLRQYNLDNNVDGFYIAPAFMDKLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCALFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCMGIFRTDGIPEQDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWVSGVGVDTIGKKLVNSKEGPPTFEQPKMSLDKLLLYGNMLVQEQENVKRVQLADKYLNEAALGNANEDAIQRGTFFSST 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1500 443 Pfam ATPase family associated with various cellular activities (AAA) 167 308 IPR003959 GO:0005524|GO:0016887
Ssu9g1500 443 Gene3D - 127 311 IPR027417 -
Ssu9g1500 443 Gene3D - 312 424 - -
Ssu9g1500 443 PANTHER - 1 441 IPR044960 -
Ssu9g1500 443 PANTHER ATPASE, AAA-TYPE, CORE, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 1 441 - -
Ssu9g1500 443 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 142 342 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1500 Ssu-Chr9 50745952 50749082 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1500 - - gmx:100797222 813.142