Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1497 ATGCCTACTTCCTTCCATTACTTCATTTTCTTCAGCATTCTAGTCTCCATCTCCCTCACAGATGGGGTACAACTCATAATGGTAAACAACTGCAAACAAAGTGTATGGCCTGGGATTCTTGGCAATGAAGGACAACTTTCCCCTATAGATGGTGGGTTTCACCTTGGAAGCGGTGAAGAGATTGTTGTCCAAGTCCCTGAGGGTTGGTCAGGGAGAATCTGGGGTAGACAAGGGTGTTGCTTCGACGAACAAACAGGCAAAGGTTCTTGTCAAACTGGTGATTGTGGAGGCCTTTTACAATGCAATGGCATTGGTGGAGTCCCTCCTGCAACCCTTGTGGAAATGACCCTTGGAACATCTCAATCAGCGTTGCATTTCTATGATGTTAGTTTGGTTGACGGGTTTAACCTTCCCGTGTCCGTGAAGCCTGTGGGTGGTGGTGGCGCAAGTTGTGGTGTTGCGGGCTGTGAGGTTAACTTGAATGTTTATTGCCCTTCTGCATTGGTTGCGGAGAGGAATGGGAGGGTTGTGGGTTGCAAGAGTGCTTGTTTGGCTGCAAAAACTGATAGGTATTGCTGCACTGGTGAGTTTGCTAAAAGCTGCAAGCCAACTGTGTTTGCTCGTCTTTTCAAGACCGTTTGCCCTCAAGCTTATAGCTATGCTTATGATGACTCAACAGTGCTCAAGACTTGTGTGGCACCTCGCTATGTCATTACATTTTGCCCTCCACACTGA 735 0.4748 MPTSFHYFIFFSILVSISLTDGVQLIMVNNCKQSVWPGILGNEGQLSPIDGGFHLGSGEEIVVQVPEGWSGRIWGRQGCCFDEQTGKGSCQTGDCGGLLQCNGIGGVPPATLVEMTLGTSQSALHFYDVSLVDGFNLPVSVKPVGGGGASCGVAGCEVNLNVYCPSALVAERNGRVVGCKSACLAAKTDRYCCTGEFAKSCKPTVFARLFKTVCPQAYSYAYDDSTVLKTCVAPRYVITFCPPH 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1497 244 SMART tha2 25 242 IPR001938 -
Ssu9g1497 244 PANTHER OS03G0233200 PROTEIN 2 244 IPR001938 -
Ssu9g1497 244 PRINTS Pathogenesis-related protein signature 24 36 IPR001938 -
Ssu9g1497 244 PRINTS Pathogenesis-related protein signature 125 141 IPR001938 -
Ssu9g1497 244 PRINTS Pathogenesis-related protein signature 72 83 IPR001938 -
Ssu9g1497 244 PRINTS Pathogenesis-related protein signature 232 241 IPR001938 -
Ssu9g1497 244 Pfam Thaumatin family 29 242 IPR001938 -
Ssu9g1497 244 ProSiteProfiles Thaumatin family profile. 25 244 IPR001938 -
Ssu9g1497 244 Gene3D Thaumatin 24 242 IPR037176 -
Ssu9g1497 244 SUPERFAMILY Osmotin, thaumatin-like protein 24 243 IPR037176 -
Ssu9g1497 244 CDD TLP-PA 24 241 - -
Ssu9g1497 244 PIRSF PR5 2 244 IPR001938 -
Ssu9g1497 244 ProSitePatterns Thaumatin family signature. 86 101 IPR017949 -
Ssu9g1497 244 PANTHER PATHOGENESIS-RELATED THAUMATIN FAMILY PROTEIN 2 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1497 Ssu-Chr9 50719493 50720766 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1497 13 242 Receptor kinase-like Gene Family AT5G38280 42.739 1.59e-52 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1497 - - gsj:114381056 439.113