Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1496 ATGGAGGAACCCACTTCTTTCTTCAACCTAGCAATTTTGGATTCCCTCACCGAAGACTCGCTGCACGAAATCCTCGACAGCTACAATGGCTTCTGCAACGCTACGCAATCCCTTCTCGCCGGCAACGGCGATCTCTCCGTCGGTCCCGACTTCGTTTCTCACGTTCACGCTCTCTGCAAGCACCGCCTCCATTCCCTCGTTCAAGACCACTTTCTCGGACTCCTCGAGGAAACGTTTGAACGAAATGGGGCATCGAGATTTTGGCGCCATTTTGACCCCTACACTCGTGTTGCGGGTTCGAGCAAGAACGATGACCTCGATattgatgaggatgagattCAGAGTGTGTTGTATAATGCTTTGGAAGGGATTACTTTGGAGAAACAGTATCAGGAGAAGTGTTTGTTCATGTTGGTGCACGCTTTGCAATCTTACAAGGACCAGATGTCGGAGGATAAGCATGGTTTTGAAGGAGAAAGGAATTACCTTACCTCTAAGTATCAATGGATTGTCTCTTCTGTACTTATGGCCACACTTCCCCGGCATTTCCCCGTTATACTGCATtggtattttaaaagaaaactggAGGAGTTAAGTACAATCATGGATGGAGAGTTCTGTGACGATGCATCTCAAAATAAGGATGGCATGGATTTAgatgaaaaagggaaaatatgCAACAAGGTTGGTGAAATGGATGTTGATGAGTGCTATAATGACCATAGGTTCTCGGAAAACAGTAGACTGGTGAAGAACATTGGAAAAGTTGTTCTTGATCTTAGGAATCTTGGATTTACTTCCATGGCTGAAGATGCTTATGCTTCTGCTATATTTTTACTACTAAAGGCAAAAGTACATGATGTAGCTGGTGATGATTTTCGGAGTTCTGTTTTACAGTCTATTAAAAGCTGGATACAGGCTGTTCCTCTCCAGTTTCTGCATGCGCTTCTTGTCTATCTTGGTGACTTTGTTAGTTACGAGAGTACTTCATCAGGTCTGAAATCACCTTTGGCACCACAACCATCTTCATGCTGTCCTGGAATTGATACTCCCTCTGAAGGGCTTGTTAGATGGAAGTTGCGGCTGGAATATTTTGCATATGAAACACTACAAGATTTAAGAATAGCCAAATTATTTGAGATAATTGTTGATTATCCTGAGAGCTCTCCTGCAATTGAAGACTTAAAATTGTGTCTTGAATACACTGGACAACATTCAAAGCTGGTGGAATCATTTATTTCATCACTGCGTTATCGCTTGCTAACTGCAGGTGCTTCAACCAATGATATATTACACCAATATGTTTCGACTATTAAAGCTCTTAGGACAATAGACCCTGCAGGTGTTTTCCTTGAGGCAGTTGGTGAACCCATAAGGGATTATTTAAGAGGAAGGAGAGATACTATAAAGTGCATAGTAACCATGCTGACAGATGGGACTGGTGGAAATTCAAGTTCATCTGGAAATCCTGGAGATAGCCTTCTTGAAGAGTTGAACAGAGATGAAGAAATTCAAGAGAAGGCTGGTGTTGATGATGATTTTAACACTGATGATAGGCAAGCATGGATCAATGCCACACGATGGCAACCTGACCCTGTGGAAGCAGATCCATTAAAAGGGAGCAGAAACCAAAGGAAGGTTGACATACTTGGGATGATTGTTGGCATAATTGGTTCAAAAGATCAATTAGTTCATGAATATCGAACTATGCTTGCTgagaaacttttaaataaatcagaTTATGATATTGATTCAGAGATACGTACTCTAGAACTCCTCAAGATACACTTTGGAGAGAGCAGCCTACAGAAATGCGAGATTATGCTCAATGATCTAATTGGCTCAAAGAGAACCAACAGTAACATTAAAGCTACCATTAATCAGCCATCTCAGACAAGTGTTGCAGTGGGAGACAGTGCAATATCCATGGACGTAATTTCTGCCACTATCATATCTTCTAATTTCTGGCCTCCAATACAGGATGAGCCCCTTAACCTGCCTGAACCTGTTGACCAGCTTCTGTCGGATTATGCAAAGAGATTTAATGAAATCAAAACTCCCCGTAAGCTGCAGTGGAAAAAAAGTCTTGGAACCATCAAGCTGGAGTTGCAGTTTCAAGATAGGGAAATGCAATTCACAGTAGCCCCTGTTCATGCATCTATGATTATGAAATTTCAAGATCAACCAAGTTGGACCTCTAAAAACCTTGCAGCTGCTATTGGGATACCTGCAGATGTTTTAAATCGGAGAATAAATTTCTGGATAAGCAAGGGAATCATTACAGAGTCACAAGGGGCAGATTCCTCTGACCATGTATACACCATTGTGGAAAACATGGTTGAGACAAGTAAGAATGGAGGGAGTACTGGTTCTACTCAGGAACTTCTAGGAGGCGATGAGGAGGAAGAGAGATCTGTGGCCTCTGTGGAAAATCAACTTCGTAAGGAAATGACTGTATATGAGAAATTTATCCTGGGGATGCTCACAAACTTTGGCAGCATGGCATTAGATCGAATTCACAATACTCTCAAGATGTTTTGCATTGCCGATCCCCCTTATGACAAGTCACTCCAACAATTACAAAGCTTTTTATCTGGTCTAGTCTCTGAGGAGAAGTTAGAACTTCGGGATGGAATGTACTTTCTTAAGAAATAG 2655 0.4094 MEEPTSFFNLAILDSLTEDSLHEILDSYNGFCNATQSLLAGNGDLSVGPDFVSHVHALCKHRLHSLVQDHFLGLLEETFERNGASRFWRHFDPYTRVAGSSKNDDLDIDEDEIQSVLYNALEGITLEKQYQEKCLFMLVHALQSYKDQMSEDKHGFEGERNYLTSKYQWIVSSVLMATLPRHFPVILHWYFKRKLEELSTIMDGEFCDDASQNKDGMDLDEKGKICNKVGEMDVDECYNDHRFSENSRLVKNIGKVVLDLRNLGFTSMAEDAYASAIFLLLKAKVHDVAGDDFRSSVLQSIKSWIQAVPLQFLHALLVYLGDFVSYESTSSGLKSPLAPQPSSCCPGIDTPSEGLVRWKLRLEYFAYETLQDLRIAKLFEIIVDYPESSPAIEDLKLCLEYTGQHSKLVESFISSLRYRLLTAGASTNDILHQYVSTIKALRTIDPAGVFLEAVGEPIRDYLRGRRDTIKCIVTMLTDGTGGNSSSSGNPGDSLLEELNRDEEIQEKAGVDDDFNTDDRQAWINATRWQPDPVEADPLKGSRNQRKVDILGMIVGIIGSKDQLVHEYRTMLAEKLLNKSDYDIDSEIRTLELLKIHFGESSLQKCEIMLNDLIGSKRTNSNIKATINQPSQTSVAVGDSAISMDVISATIISSNFWPPIQDEPLNLPEPVDQLLSDYAKRFNEIKTPRKLQWKKSLGTIKLELQFQDREMQFTVAPVHASMIMKFQDQPSWTSKNLAAAIGIPADVLNRRINFWISKGIITESQGADSSDHVYTIVENMVETSKNGGSTGSTQELLGGDEEEERSVASVENQLRKEMTVYEKFILGMLTNFGSMALDRIHNTLKMFCIADPPYDKSLQQLQSFLSGLVSEEKLELRDGMYFLKK 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1496 884 Pfam Anaphase promoting complex (APC) subunit 2 823 880 IPR014786 -
Ssu9g1496 884 MobiDBLite consensus disorder prediction 783 803 - -
Ssu9g1496 884 PANTHER ANAPHASE-PROMOTING COMPLEX SUBUNIT 2 13 884 IPR044554 -
Ssu9g1496 884 Gene3D - 799 884 IPR036388 -
Ssu9g1496 884 SUPERFAMILY Cullin homology domain 527 778 IPR036317 -
Ssu9g1496 884 SUPERFAMILY "Winged helix" DNA-binding domain 813 883 IPR036390 -
Ssu9g1496 884 Gene3D Cullin; Chain C, Domain 2 643 785 - -
Ssu9g1496 884 SMART cul_2 548 705 IPR016158 -
Ssu9g1496 884 SMART APC2_2 823 882 IPR014786 -
Ssu9g1496 884 ProSiteProfiles Cullin family profile. 552 755 IPR016158 -
Ssu9g1496 884 Pfam Cullin family 546 754 IPR001373 GO:0006511|GO:0031625
Ssu9g1496 884 PANTHER BNAC04G32030D PROTEIN 13 884 - -
Ssu9g1496 884 Gene3D Cullin Repeats 526 629 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1496 K03349 - gmx:100785428 1642.09