Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1482 ATGGTGTTGAAGAAGAGGGTAAATTATGGATTTAACGGCTTTCGGCTCCCAGTTATACCTAAAGCTCCTAGATCTGCAAGAAGGAGGGGTCCTTTCAACAAAGCAGCTGAGGATGGTCGAGCTTGTGCTATTGAACTACTGGCATCTTTAGCTGGTCAATTGTTGCAGGAGAGTGAAAGTTCTGCTTCCAGCAATGCATCTGAAGGAAATCATCAGCTTGCCTTTAGTCGAGGTGTCATTGAGCAAGATGGACAAGATGTAGTTAAACCATTAAAAACGGAGGAAATTCACCAGGGAAGTTGTGCAGAGAGTACTTTTAAGAATGAGGTAGCCTCGCGAAACAGTAGTCGGAAACATCTTCCAGTTGCCAAGACTGATTGTTTGCTAGGACGTGTTTCAGTTAATGATAATTCTGACTGTTGGGAGAAAGTTGAAGCTGATGTGAAGACTGAAATTTTCGAATGGGATCATAAATTTGGACATTATTCTAATAGATTAGTAGAAACACCTGAAAATTTTAGGGAGTCTAGTGATAGTAAAATAAAGAATGGATTTAAACGGGAACAGGAGGCTGGGAGTTCATGCTTTCAGGGATCAACTTTGGCTAATAAATGTAGTTTGAAGGACCATTTAGAATTGTATGTATCCCCTGCACTAATTGACtcaaaaagtaatattaaatcTCCACTTCATAGGAAATCTTTCCCCAGTGCTTCCTTTTCCAGGCATGGGAATGGTGTTAAGTTAGGTTTTAGAGATGATGACGAAAAATTTTTAAGGTGCAAAAAAGTTTGCATGAAGTCAAAGGCTTTTAGGTCTCCACGACGTATTGCACACCGGAGAATCAGGAATTTGATGTCTTCCAAATACTGGAAAACAGCTCCAAAGTTGAAGGACTGTGAACTTTCTAGATCTGAATTTGCAGATTTAGGAGTACCTCATTATCATAAGAGGAAGACTTGTTATGGTTTTGAAAGATCTCAGCACAATACCATTGTTAAAAGGAGGAAAGTCTTTGACCGGGTTTCCGGGGTAACTTCTGATGGAGGATTCAGCAGTGAGAGTGTGTCCAATTCACCTCAGAAAGGGACAGATGGAGACAAACCTAGCTCATCTGCAAAACTGCATGTCTCTACAACTAAGGATTCTCATGtaaagtttagcatcaagtCAATAAGGATACCAGAGCTTTATATTGAGGTTCCAGAAACTGCAACTGTTGGTTCACTAAAGagGACAATCATGGAGGCGGTGATGGCTATACTTGGAGGTGGTGCTCATGTTGGTGTTCTTCTTCAGGggaaaaaagttagagatgaCAATAGAACACTTGTGCAGACTGGCATATCTTGCAATGAAAATTTGGATACCCTCAGTTTTGTGTTGGAGCCCACTTCTCTGCAAGCTTCTCCAACTGTTTGTGTTGGTGATCCTTCTTCTCAATGTGAAATATCCCAGCCTACCAGTCCCACAGAAACTCCTGTCTTGGATTCAGGGATTACTGATACCTTGCATGATTCACCCTTGCTGACATATCCGGGCAACCTTGTTGAAAGTAACCACGAGTCTACTTCTTCACCCGCCGACACTATAGTTGACAAAATAACACCTGATTCCAGAGCGCTAGTTGCTGTTCCAGCTACCACAGAAGCATTAGCTGTGGTTCCTGTGAGTCAGAAACCCAAGCGCTCCGAGTTTGTACAGCGTCGAACCAGGAGACCATTCTCTGTGGCCGAGGTAGAAGCACTTGTTCATGCAGTTGAGGAACTTGGAACTGGGAGGTGGCGTGATGTTAAGTTGCGAGCTTTTGAGAATGCAGACCATAGGACTTATGTAGACTTAAAGGATAAATGGAAAACATTAGTGCACACTGCAACAATCTCTCCTCAACAAAGGAGAGGAGAGCCAGTACCTCAGGAGCTCTTGGACAGAGTTTTGGCTGCTCATGCTTTCTGGTCTCAGCACCAAGCCAAGCAACATGGCAAGCATCAAGCTGGACCAGGAACCTTGAAGATTGCAGAAGCCTTAGCTGAAAGACCTTGTTTGTGTTGA 2052 0.4206 MVLKKRVNYGFNGFRLPVIPKAPRSARRRGPFNKAAEDGRACAIELLASLAGQLLQESESSASSNASEGNHQLAFSRGVIEQDGQDVVKPLKTEEIHQGSCAESTFKNEVASRNSSRKHLPVAKTDCLLGRVSVNDNSDCWEKVEADVKTEIFEWDHKFGHYSNRLVETPENFRESSDSKIKNGFKREQEAGSSCFQGSTLANKCSLKDHLELYVSPALIDSKSNIKSPLHRKSFPSASFSRHGNGVKLGFRDDDEKFLRCKKVCMKSKAFRSPRRIAHRRIRNLMSSKYWKTAPKLKDCELSRSEFADLGVPHYHKRKTCYGFERSQHNTIVKRRKVFDRVSGVTSDGGFSSESVSNSPQKGTDGDKPSSSAKLHVSTTKDSHVKFSIKSIRIPELYIEVPETATVGSLKRTIMEAVMAILGGGAHVGVLLQGKKVRDDNRTLVQTGISCNENLDTLSFVLEPTSLQASPTVCVGDPSSQCEISQPTSPTETPVLDSGITDTLHDSPLLTYPGNLVESNHESTSSPADTIVDKITPDSRALVAVPATTEALAVVPVSQKPKRSEFVQRRTRRPFSVAEVEALVHAVEELGTGRWRDVKLRAFENADHRTYVDLKDKWKTLVHTATISPQQRRGEPVPQELLDRVLAAHAFWSQHQAKQHGKHQAGPGTLKIAEALAERPCLC 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1482 683 SUPERFAMILY Homeodomain-like 573 654 IPR009057 -
Ssu9g1482 683 SUPERFAMILY Ubiquitin-like 381 459 IPR029071 -
Ssu9g1482 683 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 568 626 IPR017930 -
Ssu9g1482 683 SMART sant 571 624 IPR001005 -
Ssu9g1482 683 Gene3D - 561 664 - -
Ssu9g1482 683 ProSiteProfiles Myb-like domain profile. 567 622 IPR001005 -
Ssu9g1482 683 PANTHER TELOMERE-BINDING PROTEIN, PUTATIVE-RELATED 1 675 - -
Ssu9g1482 683 PANTHER TELOMERIC REPEAT BINDING PROTEIN 1 675 IPR031105 -
Ssu9g1482 683 CDD SANT_TRF 573 623 - -
Ssu9g1482 683 MobiDBLite consensus disorder prediction 346 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1482 Ssu-Chr9 50212027 50215214 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1482 - - gmx:100814318 1148.27