Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1464 ATGGGAGATCCAGCGGAGAGGTTGGGATCGGAGGGTTTGGATTCCGGCGCCGCCGTTAAGACCGATGACTTGTGCATGGAAATCGATCCGCCATTTCAGGAAAATGTCGCGACCGCCGAGGACTGGCGCAAAGCCCTCAACAAAGTCGTCCCCGCCGTCGTCGTCCTCCGAACCACCGCCACTCGCTCCTTCGACACTGAGTCCGCCGCCGCCAGCTACGCCACCGGCTTCATCGTCGACAAGCGCCGCGGCATCATTCTCACCAATCGCCACGTCGTCAAGCCAGGTCCTGTGGTTGCCGAAGCCATGTTTCTGAACCGCGAAGAGGTTCCGGTGCATCCGATTTACCGAGATCCGGTACATGATTTTGGATTCTTTCGTTATGATCCGGGCGCTATACAATTTCTGAACTATGAGGAGATACCTCTTGCTCCTGAAGCTGCCTGTGTTGGACTAGAAATCAGAGTTGTTGGTAATGATAGTGGTGAGAAGGTTTCCATTTTGGCTGGTACTCTTGCTCGTTTGGATAGGGATGCTCCTCATTATAAGAAGGATGGGTATAATGACTTCAACACATTCTATATGCAAGCAGCATCTGGGACCAAAGGAGGGTCAAGTGGTTCCCCAGTTATAGATTGGCAAGGCAGGGCAGTGGCCCTGAATGCTGGGAGCAAGTCATCAAGTGCATCAGCATTCTTTCTACCTCTAGAACAAGTTGTGAGGGCATTAAGGTTTCTTCAAAAGGGAAGTGAAACTTATGTTGATAAATGGAAGGCAGTTTCTATACCTCGTGGTACGCTTCAGgTGACATTTCTCCATAAAGGGTTTGATGAGACTCGTCGGCTTGGCCTCAGAAGTGAGACAGAGCAGATAGTACGTCATGCTTCTCCAGCTGGAGAAACTGGAATGCTTGTTGTGGACTCTGTGGTGCCAGGTGGTCCGGGTTATAAACATTTGGAACCGGGTGATGTACTTGTTCGTGTCAATGGAGAAGTCATTACTCAATTCCTGAAGCTGGAGACTCTACTTGATGACAGTGTAAACAAGAATATTGAATTACAAATTGAAAGGGGTGGCACATCAAAGAGTTTAACTTTGTTGGTGCAAGATTTGCACTCAATAACGCCTGATTATTTCTTAGAAGTGAGTGGGGCAGTAATACATCCTCTTTCTTATCAGCAGGCTAGAAACTTCCGTTTCCATTGTGGTCTTGTTTATGTGGCTGAACCAGGATATATGCTCTTCAGAGCAGGAGTTCCTCGCCAtgcaataattaagaaatttgcTGGGGAAGAAATATCTTGTCTTGAGGAACTAATATCAGTTCTTTCTAAGCTATCTAGGGGTGCCCGAGTACCATTGGAATATATAAGCTACATGGATCGTCATCGAAGGAAGTCTGTGTTGGTGACGGTTGATCGGCATGAATGGTATGCACCTTCCCAGATATACACTCGTGATGACAGTACTGGCCTTTGGATTGCTAAGCCTGCTTTTCAGCATGATTCCCCCTTTCTATCGTCTGGTAGTGCTAAAGATGTTGAAAATCTGTCTAGACATCCAGTTTCACTAACTGGTGAGCATACTTGTGGGGGACATGTGTGTGAAGATAACAATCAGGAGTTGGTTGATGGTGTCACTAGCATGGAAACCAATTATGAAGATCCCTCAGAGTGTGTATCTCACCACAATGCATCTGATGGCGTGGTGAAAAAACGAAGAGTGGGGGAAGATTTATCAGCTGATGGAAGTGTTGTTGCTGATTTTTCCTTAAATGATACCAGGGAAACTAAGCTAGAAAAATCAAGTGTTATACAAGATGACATGTTAATGGACTATCAGGGAGCAACTGCAGCTGCAGCAAATGCATCAGTTGCTGAACGTGTGATCGAGCCTACTCTTGTGATGTTTGAGGTTCATGTTCCCCCATCTTGTATGCTTGATGGTGTTCATTCACAGCACTTTTTTGGAACTGGTGTCATAATATATCACTCTCAAGATATGGGATTAGTTGCAGTTGACAAGAATACAGTTGCAATATCTGCCTCTGATGTAATGCTATCCTTCGCTGCCTTCCCAGTTGAAATTCCAGGAGAGGTGGTATTTCTGCATCCTGTTCACAATTATGCTCTCATATCATATGATCCGGCTGCATTGGGACCTGTTGGTGGTTCAGTTGTTCGTGCTGCAGAGTTACTTCCAGAACCAGCATTGCACCGGGGTGATTCTGTTTACCTTGTGGGGTTGAGTAGAAGTCTTCAAGCAACTTCTAGGAAATCAGTTGTTACGAATCCTTGTGCTGCATTAAATATAGGATCTGCTGATTCCCCTCGCTACAGAGCAACCAATATGGAAGTAATTGAGCTTGATACAGATTTTGGTAGTACATTTTCGGGTGTTCTAACAGACGAACAAGGAAGGGTCCAAGCTATATGGGGAAGCTTCTCAACTCAGAAGAAGGACAAGAGAAGAAAGACAAAAACTGGAAAGAGACGAGAGAAGACAAATTTTACTCAAACTTCAAAAGGCTACCTGATGCTGAAATTTGGTTGCAGTACCTCAGAAGATCATCAATTTGTGAGGGGTATTCCAATTTATGCAATAAGTCAGGTCCTTGACAAGATTGTATCTGGTGCAAATGGGCCACCTCTTCTCATAAATGGTGTCAAAAGGCCTATGCCACTTGTTAGAATTCTAGAGGTTGAACTTTATCCAACATTGCTTTCAAAGGCTCGGAGTTTTGGATTAAGTGATGATTGGGTTCAGGCACTTGTTAAGAAAGATCCAGTAAGACGTCAGGTTTTACGTGTTAAAGGTTGTTTGGCTGGATCAAAGGCTGAGAATCTTTTAGAACAAGGGGACATGGTTTTAGCAATAAATAAAGAACCAGTCACATGCTTCCGTGACATCGAAAATGCTTGCCAAGCTCTAGACAAATCTAACAACAATGATGGGAAGCTTCACTTGACTATTTTCCGACAGGGACAAGAGGTTGAACTTCTTGTGGGAACAGATGTTAGGGATGGAAATGGCACTGCTCGTGCAATTAATTGGTGTGGTTGTATTGTTCAAGATCCACATCCAGCAGTACGTGCTCTTGGATTTCTTCCCGAAGAAGGTCATGGTGTATATGTGGCAAGGTGGTGTCATGGAAGTCCTGTACATAGATATGGTCTATATGCTCTTCAGTGGATAGTTGAAATTAATGGAAAACCAACTCGAAATCTAGATTCTTTCGTTGATGTGACAAAGGAACTAGAACATGGTGAGTTTGTTCGTGTAAAGACAATTCACCTCAATGGGAAGCCACGAGTCCTAACATTGAAGCAAGATTTGCACTACTGGCCTACGTGGGAATTGAGATTTGATCCAGATACTGCGATGTGGCATCGCATTATAATCAAGGGATTGAACTGCAGTACTGTATGA 3429 0.4436 MGDPAERLGSEGLDSGAAVKTDDLCMEIDPPFQENVATAEDWRKALNKVVPAVVVLRTTATRSFDTESAAASYATGFIVDKRRGIILTNRHVVKPGPVVAEAMFLNREEVPVHPIYRDPVHDFGFFRYDPGAIQFLNYEEIPLAPEAACVGLEIRVVGNDSGEKVSILAGTLARLDRDAPHYKKDGYNDFNTFYMQAASGTKGGSSGSPVIDWQGRAVALNAGSKSSSASAFFLPLEQVVRALRFLQKGSETYVDKWKAVSIPRGTLQVTFLHKGFDETRRLGLRSETEQIVRHASPAGETGMLVVDSVVPGGPGYKHLEPGDVLVRVNGEVITQFLKLETLLDDSVNKNIELQIERGGTSKSLTLLVQDLHSITPDYFLEVSGAVIHPLSYQQARNFRFHCGLVYVAEPGYMLFRAGVPRHAIIKKFAGEEISCLEELISVLSKLSRGARVPLEYISYMDRHRRKSVLVTVDRHEWYAPSQIYTRDDSTGLWIAKPAFQHDSPFLSSGSAKDVENLSRHPVSLTGEHTCGGHVCEDNNQELVDGVTSMETNYEDPSECVSHHNASDGVVKKRRVGEDLSADGSVVADFSLNDTRETKLEKSSVIQDDMLMDYQGATAAAANASVAERVIEPTLVMFEVHVPPSCMLDGVHSQHFFGTGVIIYHSQDMGLVAVDKNTVAISASDVMLSFAAFPVEIPGEVVFLHPVHNYALISYDPAALGPVGGSVVRAAELLPEPALHRGDSVYLVGLSRSLQATSRKSVVTNPCAALNIGSADSPRYRATNMEVIELDTDFGSTFSGVLTDEQGRVQAIWGSFSTQKKDKRRKTKTGKRREKTNFTQTSKGYLMLKFGCSTSEDHQFVRGIPIYAISQVLDKIVSGANGPPLLINGVKRPMPLVRILEVELYPTLLSKARSFGLSDDWVQALVKKDPVRRQVLRVKGCLAGSKAENLLEQGDMVLAINKEPVTCFRDIENACQALDKSNNNDGKLHLTIFRQGQEVELLVGTDVRDGNGTARAINWCGCIVQDPHPAVRALGFLPEEGHGVYVARWCHGSPVHRYGLYALQWIVEINGKPTRNLDSFVDVTKELEHGEFVRVKTIHLNGKPRVLTLKQDLHYWPTWELRFDPDTAMWHRIIIKGLNCSTV 1142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1464 1142 Gene3D - 1015 1113 IPR036034 GO:0005515
Ssu9g1464 1142 PANTHER PROTEASE DO-LIKE 7 846 1137 - -
Ssu9g1464 1142 PANTHER PROTEASE DO-LIKE 7 21 821 - -
Ssu9g1464 1142 Pfam Peptidase family M50 254 372 IPR008915 GO:0004222|GO:0006508
Ssu9g1464 1142 Gene3D - 146 256 IPR043504 -
Ssu9g1464 1142 Pfam Trypsin-like peptidase domain 74 220 - -
Ssu9g1464 1142 Pfam PDZ domain 305 357 IPR041489 -
Ssu9g1464 1142 ProSiteProfiles PDZ domain profile. 269 333 IPR001478 GO:0005515
Ssu9g1464 1142 CDD PDZ_metalloprotease 305 366 - -
Ssu9g1464 1142 Pfam PDZ-like domain 373 446 IPR025926 -
Ssu9g1464 1142 Pfam PDZ-like domain 1013 1088 IPR025926 -
Ssu9g1464 1142 PANTHER PRO-APOPTOTIC SERINE PROTEASE NMA111 21 821 - -
Ssu9g1464 1142 Gene3D - 934 1008 IPR036034 GO:0005515
Ssu9g1464 1142 SUPERFAMILY Trypsin-like serine proteases 633 819 IPR009003 -
Ssu9g1464 1142 PANTHER PRO-APOPTOTIC SERINE PROTEASE NMA111 846 1137 - -
Ssu9g1464 1142 SUPERFAMILY PDZ domain-like 936 1038 IPR036034 GO:0005515
Ssu9g1464 1142 Gene3D - 280 372 IPR036034 GO:0005515
Ssu9g1464 1142 SMART pdz_new 1031 1100 IPR001478 GO:0005515
Ssu9g1464 1142 SMART pdz_new 280 359 IPR001478 GO:0005515
Ssu9g1464 1142 SMART pdz_new 910 995 IPR001478 GO:0005515
Ssu9g1464 1142 Gene3D - 29 139 IPR043504 -
Ssu9g1464 1142 PRINTS HtrA/DegQ protease family signature 318 330 IPR001940 GO:0004252|GO:0006508
Ssu9g1464 1142 PRINTS HtrA/DegQ protease family signature 213 230 IPR001940 GO:0004252|GO:0006508
Ssu9g1464 1142 PRINTS HtrA/DegQ protease family signature 150 174 IPR001940 GO:0004252|GO:0006508
Ssu9g1464 1142 PRINTS HtrA/DegQ protease family signature 191 208 IPR001940 GO:0004252|GO:0006508
Ssu9g1464 1142 PRINTS HtrA/DegQ protease family signature 84 96 IPR001940 GO:0004252|GO:0006508
Ssu9g1464 1142 SUPERFAMILY PDZ domain-like 304 403 IPR036034 GO:0005515
Ssu9g1464 1142 SUPERFAMILY PDZ domain-like 1040 1134 IPR036034 GO:0005515
Ssu9g1464 1142 SUPERFAMILY Trypsin-like serine proteases 40 244 IPR009003 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1464 Ssu-Chr9 49940272 49958683 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1464 K22686 - gmx:100809144 2122.44