Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1454 ATGATGGAAATAAGCATTGCAAGTAGGTCTCATCTCGAAACACAGggaatattcttttcaaatatttcaagaacAATAGGATGGGAAAACACTAAGAAACTTCCATGTAATGTGGCTGCCCAGAGTTCACGACAGGACTTTCACAGATTGGCCTCTTCCTGTCAAGCTTTTACTGCAGTGTATCCTAGAATGCCTTTTATCTGTAGAGCAAATTCTATGCCAATTAGTTTACAGGAATCTGCATCATATGGAGATAATTCTATTGAGGATGAGGATCCATCTACAGGCTCGGAAGAGGAAACTTTGGCACAACCACTTACCAGTGAAcagATAATGGCACTGCTTGCTGACACTGAGAGAACAAAACTCACTAAGAAGCTTAGTGAGGCCAACCAGCAGAATCGGTTCCTAAAAAGACAGTTGCATGTAAAGGAGGAAGCATTGGTAAAATTCAAAAGTGAACTTGCTGTCATAGAGCTTGAAATTCAGGCTTTGGCCAGACTAGCAGAAGAAATAGCTCAATGTGGTATTCCAGAAGGTTCAAGGAAGATCAATGGAAAGTACATTCATTCTCAccttgttgctagattagaagCTGTACGTGAACGACTGAAGGAACAAATAAAGGATGTTGATTTGGCACAATCGAAGGAGGTTTCTCTGTTTTGGGTTGGCATGGCTGAGAGCGTGCAAGTTATGGGCACCTTTGATGGCTGGAGCCAAGGGGAGCACCTTTCACCTGAGTATACTGGATCTTACACGAGGTTTTCAACAACATTGATGCTCAGGCCAGGAAGgTATGAAATCAAATTCTTAGTAGATGGTGAATGGCAGCTGTCACCAGAATTTCCCATTATTGGTGAAGGGTTAacgaaaaataatttgttagttGTTGAGTAA 900 0.39 MMEISIASRSHLETQGIFFSNISRTIGWENTKKLPCNVAAQSSRQDFHRLASSCQAFTAVYPRMPFICRANSMPISLQESASYGDNSIEDEDPSTGSEEETLAQPLTSEQIMALLADTERTKLTKKLSEANQQNRFLKRQLHVKEEALVKFKSELAVIELEIQALARLAEEIAQCGIPEGSRKINGKYIHSHLVARLEAVRERLKEQIKDVDLAQSKEVSLFWVGMAESVQVMGTFDGWSQGEHLSPEYTGSYTRFSTTLMLRPGRYEIKFLVDGEWQLSPEFPIIGEGLTKNNLLVVE 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1454 299 CDD E_set_AMPKbeta_like_N 218 298 - -
Ssu9g1454 299 SUPERFAMILY E set domains 219 298 IPR014756 -
Ssu9g1454 299 PANTHER PROTEIN PTST, CHLOROPLASTIC 8 299 - -
Ssu9g1454 299 Pfam Glycogen recognition site of AMP-activated protein kinase 219 295 IPR032640 -
Ssu9g1454 299 Coils Coil 120 147 - -
Ssu9g1454 299 Coils Coil 194 217 - -
Ssu9g1454 299 MobiDBLite consensus disorder prediction 80 103 - -
Ssu9g1454 299 Gene3D Immunoglobulins 210 298 IPR013783 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1454 Ssu-Chr9 49798231 49803071 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1454 - - gmx:100806282 533.872